Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Staphylococcus epidermidis ATCC 12228

Properties
Regulator type: Transcription factor
TF locus tag: SE1409
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-diphosphate
Regulog: CcpA - Staphylococcaceae
Statistics of regulated genes:
- Genes 75
- Operons 47
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 391 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -66
Score: 4.3
Sequence: ATGTAAGCGCATTATT
Locus tag: SE2063
Name: fbp
Funciton: fructose-bisphosphatase
SE2063
fbp
fructose-bisphosphatase
Position: -143
Score: 4.4
Sequence: ATGTATTCGCTTCCAA
Locus tag: SE1723
Name: fbaA
Funciton: fructose-bisphosphate aldolase
SE1723
fbaA
fructose-bisphosphate aldolase
Position: -85
Score: 4.5
Sequence: TTGACAACGCTTACTT
Locus tag: SE2047
Name: glpT
Funciton: glycerol-3-phosphate transporter
SE2047
glpT
glycerol-3-phosphate transporter
Position: -130
Score: 4.7
Sequence: TTGACAACGCTTACAA
Locus tag: SE0977
Name: glpF
Funciton: glycerol uptake facilitator
Locus tag: SE0978
Name: glpK
Funciton: glycerol kinase
Locus tag: SE0979
Name: glpD
Funciton: aerobic glycerol-3-phosphate dehydrogenase
SE0977
glpF
glycerol uptake facilitator
SE0978
glpK
glycerol kinase
SE0979
glpD
aerobic glycerol-3-phosphate dehydrogenase
Position: -178
Score: 4.6
Sequence: TTGTAAACGCTTTATT
Locus tag: SE2102
Name: glcA
Funciton: glucose-specific PTS enzyme IIABC
SE2102
glcA
glucose-specific PTS enzyme IIABC
Position: -109
Score: 5
Sequence: TAGTAAACGCTTACAT
Locus tag: SE1898
Name: glvR
Funciton: transcriptional regulator of maltose utilization, RpiR family
SE1898
glvR
transcriptional regulator of maltose utilization, RpiR family
Position: -104
Score: 5
Sequence: ATGTAAGCGTTTACTA
Locus tag: SE1897
Name: glvC
Funciton: maltose-specific enzyme IICB of PTS system
SE1897
glvC
maltose-specific enzyme IICB of PTS system
Position: -71
Score: 4.1
Sequence: TTTATAAGGTTTACAT
Locus tag: SE1924
Name: gltS
Funciton: sodium/glutamate symporter
SE1924
gltS
sodium/glutamate symporter
Position: -164
Score: 4.6
Sequence: TTGTAACCGTTTACAC
Locus tag: SE2056
Name: gudP
Funciton: glucarate transporter
SE2056
gudP
glucarate transporter
Position: -74
Score: 4.1
Sequence: TTTAAAATGCTTTCAA
Position: -41
Score: 4.3
Sequence: ATGAAAGCGAAATCAT
Locus tag: SE0654
Name: gudB
Funciton: NAD-specific glutamate dehydrogenase
SE0654
gudB
NAD-specific glutamate dehydrogenase
Position: -83
Score: 4.7
Sequence: AAGAAAGCGCTTGCAA
Locus tag: SE2046
Name: gntR
Funciton: gluconate operon transcriptional repressor
Locus tag: SE2045
Name: gntK
Funciton: gluconokinase
Locus tag: SE2044
Name: gntP
Funciton: gluconate permease
SE2046
gntR
gluconate operon transcriptional repressor
SE2045
gntK
gluconokinase
SE2044
gntP
gluconate permease
Position: -45
Score: 4.3
Sequence: ATTAAAGCGTTTTCTC
Locus tag: SE2227
Name: manR
Funciton: antiterminator for mannose operon, BglG family
SE2227
manR
antiterminator for mannose operon, BglG family
Position: -45
Score: 4.9
Sequence: ATGTATGCGTTTACAA
Locus tag: SE2228
Name: manP
Funciton: PTS system mannose-specific EIIBCA component
Locus tag: SE2229
Name: manA
Funciton: mannose-6-phosphate isomerase
SE2228
manP
PTS system mannose-specific EIIBCA component
SE2229
manA
mannose-6-phosphate isomerase
Position: -117
Score: 4.7
Sequence: ATGTAAACGTTTTCTC
Locus tag: SE1191
Name: null
Funciton: alpha-D-1,4-glucosidase
SE1191
alpha-D-1,4-glucosidase
Position: -123
Score: 4.3
Sequence: TGTAAAGCGCTTACAT
Locus tag: SE2110
Name: mvaS
Funciton: 3-hydroxy-3-methylglutaryl CoA synthase
SE2110
mvaS
3-hydroxy-3-methylglutaryl CoA synthase
Position: -137
Score: 4.3
Sequence: ATGTAAGCGCTTTACA
Locus tag: SE2109
Name: mvaA
Funciton: hydroxymethylglutaryl-CoA reductase
SE2109
mvaA
hydroxymethylglutaryl-CoA reductase
Position: -81
Score: 4.4
Sequence: GAGAAAGCGCTTTAAT
Locus tag: SE1943
Name: mqo
Funciton: malate:quinone oxidoreductase
SE1943
mqo
malate:quinone oxidoreductase
Position: -37
Score: 4.8
Sequence: TTGAAAACGTTAACAA
Locus tag: SE0214
Name: pflB
Funciton: Pyruvate formate lyase
Locus tag: SE0215
Name: pflA
Funciton: Pyruvate formate lyase activating enzyme
SE0214
pflB
Pyruvate formate lyase
SE0215
pflA
Pyruvate formate lyase activating enzyme
Position: -152
Score: 4.8
Sequence: TTTAAAACGTTTACAT
Locus tag: SE1374
Name: pfkA
Funciton: 6-phosphofructokinase
Locus tag: SE1373
Name: pykA
Funciton: pyruvate kinase
SE1374
pfkA
6-phosphofructokinase
SE1373
pykA
pyruvate kinase
Position: -41
Score: 5
Sequence: ATGTAAGGGCTTACAT
Locus tag: SE1459
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase
SE1459
pckA
phosphoenolpyruvate carboxykinase
Position: -63
Score: 4.2
Sequence: ATGTTAGCGTGTTCAT
Locus tag: SE0283
Name: nupC
Funciton: pyrimidine nucleoside transporter
SE0283
nupC
pyrimidine nucleoside transporter
Position: -87
Score: 4.6
Sequence: GTGTAAGCGTATACAA
Locus tag: SE2088
Name: rbsU
Funciton: ribose transporter RbsU
Locus tag: SE2087
Name: rbsD
Funciton: ribose permease
Locus tag: SE2086
Name: rbsK
Funciton: ribokinase
SE2088
rbsU
ribose transporter RbsU
SE2087
rbsD
ribose permease
SE2086
rbsK
ribokinase
Position: -80
Score: 5.1
Sequence: ATGTAAACGCTTTCTT
Locus tag: SE1437
Name: putA
Funciton: proline dehydrogenase
SE1437
putA
proline dehydrogenase
Position: -131
Score: 4.6
Sequence: AATTAAGCGTTTACAT
Locus tag: SE1403
Name: ptaA
Funciton: PTS system N-acetylglucosamine-specific IIBC component
Locus tag: SE1402
Name: SE1402
Funciton: hypothetical hydrolase
SE1403
ptaA
PTS system N-acetylglucosamine-specific IIBC component
SE1402
SE1402
hypothetical hydrolase
Position: -68
Score: 4.8
Sequence: TTGAAATCGCTTTCTT
Locus tag: SE2082
Name: pfoR
Funciton: putative PTS transporter
Locus tag: SE2081
Name: sdaAB
Funciton: L-serine dehydratase beta chain
Locus tag: SE2080
Name: sdaAA
Funciton: L-serine dehydratase alpha chain
SE2082
pfoR
putative PTS transporter
SE2081
sdaAB
L-serine dehydratase beta chain
SE2080
sdaAA
L-serine dehydratase alpha chain
Position: -180
Score: 5
Sequence: ATGTAAGGGCTTACAT
Locus tag: SE0653
Name: rocD
Funciton: ornithine aminotransferase
SE0653
rocD
ornithine aminotransferase
Position: -149
Score: 4.9
Sequence: ATGTAAGCGTTTGCAA
Locus tag: SE2116
Name: rocA
Funciton: 1-pyrroline-5-carboxylate dehydrogenase
SE2116
rocA
1-pyrroline-5-carboxylate dehydrogenase
Position: -130
Score: 4.7
Sequence: GTGTAATCGTTTTCAA
Locus tag: SE1762
Name: SA1975
Funciton: predicted membrane-bound hydrolase
Locus tag: SE1761
Name: SA1974
Funciton: UDP-N-acetylglucosamine pyrophosphorylase
Locus tag: SE1760
Name: SA1973
Funciton: hemolysin III
SE1762
SA1975
predicted membrane-bound hydrolase
SE1761
SA1974
UDP-N-acetylglucosamine pyrophosphorylase
SE1760
SA1973
hemolysin III
Position: -29
Score: 4.4
Sequence: GTGAAAGCGCTTGCTA
Locus tag: SE1007
Name: SA1162
Funciton: hypothetical protein
SE1007
SA1162
hypothetical protein
Position: -62
Score: 4.4
Sequence: AAGTAACGGTTTTCAA
Locus tag: SE0715
Name: SA0873
Funciton: DJ-1/PfpI family protein
SE0715
SA0873
DJ-1/PfpI family protein
Position: -62
Score: 4.7
Sequence: TTGAAAACGATTACAC
Position: -15
Score: 4
Sequence: AAGGAAGTGTTTTCAA
Locus tag: SE1763
Name: SAS074
Funciton: hypothetical protein
SE1763
SAS074
hypothetical protein
Position: -130
Score: 5
Sequence: TTGTAAGCGTTTTCTA
Locus tag: SE1885
Name: SA2105
Funciton: hypothetical protein
SE1885
SA2105
hypothetical protein
Position: -58
Score: 4.4
Sequence: TTGGAACCGGTTACAA
Locus tag: SE1959
Name: scrA
Funciton: PTS system sucrose-specific IIBC component
SE1959
scrA
PTS system sucrose-specific IIBC component
Position: 2
Score: 4.3
Sequence: GTTGAAACGCTTTCAT
Locus tag: SE0247
Name: SE0247
Funciton: bicyclomycin resistance protein TcaB
SE0247
SE0247
bicyclomycin resistance protein TcaB
Position: -270
Score: 4.7
Sequence: ATGGAAGCGTTTTCTA
Locus tag: SE0840
Name: sdhC
Funciton: succinate dehydrogenase cytochrome b subunit
Locus tag: SE0841
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit
Locus tag: SE0842
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein subunit
SE0840
sdhC
succinate dehydrogenase cytochrome b subunit
SE0841
sdhA
succinate dehydrogenase flavoprotein subunit
SE0842
sdhB
succinate dehydrogenase iron-sulfur protein subunit
Position: -245
Score: 4.4
Sequence: ATTAAAGCGCTTTCTC
Locus tag: SE1944
Name: SE1944
Funciton: putative glycosyltransferase
SE1944
SE1944
putative glycosyltransferase
Position: -61
Score: 4.7
Sequence: TATTAAGCGCTTACAT
Locus tag: SE0164
Name: uhpT
Funciton: hexose phosphate transport protein
SE0164
uhpT
hexose phosphate transport protein
Position: -146
Score: 4.6
Sequence: TTGAAAGCGTATACTA
Locus tag: SE0235
Name: SE0235
Funciton: glycerol dehydrogenase
Locus tag: SE0236
Name: dhaK
Funciton: dihydroxyacetone kinase, DhaK subunit
Locus tag: SE0237
Name: dhaL
Funciton: dihydroxyacetone kinase, DhaL subunit
Locus tag: SE0238
Name: SA0607
Funciton: conserved hypothetical protein
SE0235
SE0235
glycerol dehydrogenase
SE0236
dhaK
dihydroxyacetone kinase, DhaK subunit
SE0237
dhaL
dihydroxyacetone kinase, DhaL subunit
SE0238
SA0607
conserved hypothetical protein
Position: -43
Score: 4.7
Sequence: TTGAAAGCCATTTCAT
Locus tag: SE1371
Name: citZ
Funciton: citrate synthase
Locus tag: SE1370
Name: citC
Funciton: isocitrate dehyrogenase
SE1371
citZ
citrate synthase
SE1370
citC
isocitrate dehyrogenase
Position: -103
Score: 4.4
Sequence: AATAAAGCGTTTTCTA
Locus tag: SE1032
Name: citB
Funciton: aconitate hydratase
SE1032
citB
aconitate hydratase
Position: -71
Score: 4.6
Sequence: AATAAAACGTTTACAA
Locus tag: SE1409
Name: ccpA
Funciton: catabolite control protein A
SE1409
ccpA
catabolite control protein A
Position: -50
Score: 4.6
Sequence: TTGAAAGCGTTTTATA
Locus tag: SE0106
Name: arcA2
Funciton: arginine deiminase
Locus tag: SE0105
Name: arcD2
Funciton: arginine/ornithine antiporter
Locus tag: SE0104
Name: arcR2
Funciton: transcription regulator of arginine catabolism, Crp/Fnr family
Locus tag: SE0103
Name: arcB2
Funciton: ornithine carbamoyltransferase
Locus tag: SE0102
Name: arcC
Funciton: carbamate kinase
SE0106
arcA2
arginine deiminase
SE0105
arcD2
arginine/ornithine antiporter
SE0104
arcR2
transcription regulator of arginine catabolism, Crp/Fnr family
SE0103
arcB2
ornithine carbamoyltransferase
SE0102
arcC
carbamate kinase
Position: -304
Score: 4.3
Sequence: tgGtAAGCGtaTaCAT
Locus tag: SE2217
Name: arcA
Funciton: arginine deiminase
Locus tag: SE2216
Name: arcB
Funciton: ornithine carbamoyltransferase
SE2217
arcA
arginine deiminase
SE2216
arcB
ornithine carbamoyltransferase
Position: -101
Score: 4.6
Sequence: TTGTAAACACTTACAT
Locus tag: SE1914
Name: null
Funciton: putative L-ribulokinase
SE1914
putative L-ribulokinase
Position: -68
Score: 5.1
Sequence: AaGtAAaCGCTTaCAT
Locus tag: SE2071
Name: aldA
Funciton: aldehyde dehydrogenase
SE2071
aldA
aldehyde dehydrogenase
Position: -37
Score: 5.1
Sequence: AAGAAAGCGCTTACAA
Locus tag: SE0253
Name: acoL
Funciton: dihydrolipoamide dehydrogenase
Locus tag: SE0254
Name: acoA
Funciton: acetoin dehydrogenase E1 subunit alpha
Locus tag: SE0255
Name: acoB
Funciton: acetoin dehydrogenase E1 subunit beta
Locus tag: SE0256
Name: acoC
Funciton: acetoin dehydrogenase E2 component
SE0253
acoL
dihydrolipoamide dehydrogenase
SE0254
acoA
acetoin dehydrogenase E1 subunit alpha
SE0255
acoB
acetoin dehydrogenase E1 subunit beta
SE0256
acoC
acetoin dehydrogenase E2 component
Position: -41
Score: 5.1
Sequence: AAGTAAACGCTTTCAT
Locus tag: SE2004
Name: aapA
Funciton: D-serine/D-alanine/glycine transporter
SE2004
aapA
D-serine/D-alanine/glycine transporter
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise