Regulon of CcpA in Staphylococcus capitis SK14

Properties
Regulator type:	Transcription factor
TF locus tag:	STACA0001_0629
Regulator family:	LacI
Regulation mode:	repressor (activator)
Biological process:	Carbon catabolism
Effector:	HPr, phosphocarrier protein; Fructose-1,6-diphosphate
Regulog:	CcpA - Staphylococcaceae
Statistics of regulated genes:
- Genes	79
- Operons	54
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 391 sites [see more]

Member of regulog collections

By taxonomy - Staphylococcaceae
By trascription factor - CcpA
By TF family - LacI
By effector - HPr, phosphocarrier protein
By effector - Fructose-1,6-diphosphate
By pathway - Carbon catabolism

Regulated operons
	Locus Tag	Name	Function
Position: -75 Score: 4.7 Sequence: ATGTTAGCGCTTACAC Locus tag: STACA0001_0466 Name: SSP0207 Funciton: major facilitator family sugar transporter
	STACA0001_0466	SSP0207	major facilitator family sugar transporter
Position: -267 Score: 4.7 Sequence: ATTAAAGCGCTTTCTA Locus tag: STACA0001_1120 Name: SE1944 Funciton: putative glycosyltransferase
	STACA0001_1120	SE1944	putative glycosyltransferase
Position: -61 Score: 4.9 Sequence: ATTAAAACGCTTTCAT Locus tag: STACA0001_0048 Name: SE0247 Funciton: major myo-inositol transporter IolT
	STACA0001_0048	SE0247	major myo-inositol transporter IolT
Position: -286 Score: 4.4 Sequence: GTGGAAGCGTTTTCTA Locus tag: STACA0001_2159 Name: sdhC Funciton: succinate dehydrogenase cytochrome b subunit Locus tag: STACA0001_2160 Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit Locus tag: STACA0001_2161 Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein subunit
	STACA0001_2159	sdhC	succinate dehydrogenase cytochrome b subunit
	STACA0001_2160	sdhA	succinate dehydrogenase flavoprotein subunit
	STACA0001_2161	sdhB	succinate dehydrogenase iron-sulfur protein subunit
Position: -67 Score: 4.7 Sequence: TTTAAAGCGATTACAT Locus tag: STACA0001_2124 Name: scrR Funciton: sucrose operon repressor
	STACA0001_2124	scrR	sucrose operon repressor
Position: -63 Score: 4.4 Sequence: TTGGAACCGGTTACAA Position: -34 Score: 4.2 Sequence: ATGGAACCGGTTTCTA Locus tag: STACA0001_1097 Name: scrA Funciton: PTS system sucrose-specific IIBC component
	STACA0001_1097	scrA	PTS system sucrose-specific IIBC component
Position: -81 Score: 4.6 Sequence: TTGAAAGCCCTATCAT Locus tag: STACA0001_1147 Name: araB Funciton: putative L-ribulokinase
	STACA0001_1147	araB	putative L-ribulokinase
Position: -85 Score: 5 Sequence: AAGTAAACGTTTACAT Locus tag: STACA0001_0986 Name: aldA Funciton: aldehyde dehydrogenase
	STACA0001_0986	aldA	aldehyde dehydrogenase
Position: -52 Score: 4.6 Sequence: ATGATTGCGCTTTCAA Locus tag: STACA0001_0602 Name: ald Funciton: alanine dehydrogenase
	STACA0001_0602	ald	alanine dehydrogenase
Position: -154 Score: 4.9 Sequence: ATGAAATCGCTTTCTT Locus tag: STACA0001_0627 Name: acuA Funciton: acetoin utilization protein AcuA Locus tag: STACA0001_0628 Name: acuC Funciton: acetoin utilization protein AcuC
	STACA0001_0627	acuA	acetoin utilization protein AcuA
	STACA0001_0628	acuC	acetoin utilization protein AcuC
Position: -35 Score: 4.9 Sequence: AAGAAAGCGATTTCAT Locus tag: STACA0001_0626 Name: acsA Funciton: acetyl-CoA synthetase
	STACA0001_0626	acsA	acetyl-CoA synthetase
Position: -45 Score: 5.1 Sequence: AAGAAAACGCTTTCAT Locus tag: STACA0001_1050 Name: aapA Funciton: D-serine/D-alanine/glycine transporter
	STACA0001_1050	aapA	D-serine/D-alanine/glycine transporter
Position: -75 Score: 4.5 Sequence: TTTATAACGCTTACAT Locus tag: STACA0001_1139 Name: gltS Funciton: sodium/glutamate symporter
	STACA0001_1139	gltS	sodium/glutamate symporter
Position: -132 Score: 4.7 Sequence: TTGACAACGCTTACAA Locus tag: STACA0001_1544 Name: glpF Funciton: glycerol uptake facilitator Locus tag: STACA0001_1545 Name: glpK Funciton: glycerol kinase
	STACA0001_1544	glpF	glycerol uptake facilitator
	STACA0001_1545	glpK	glycerol kinase
Position: -46 Score: 4.3 Sequence: ATGTAAGCGCACTCAT Locus tag: STACA0001_0331 Name: fruR Funciton: transcription repressor of fructose operon, DeoR family Locus tag: STACA0001_0330 Name: fruB Funciton: fructose 1-phosphate kinase Locus tag: STACA0001_0329 Name: fruA Funciton: PTS system fructose-specific IIABC component
	STACA0001_0331	fruR	transcription repressor of fructose operon, DeoR family
	STACA0001_0330	fruB	fructose 1-phosphate kinase
	STACA0001_0329	fruA	PTS system fructose-specific IIABC component
Position: -66 Score: 4 Sequence: ATGTAAGCGCATTACT Locus tag: STACA0001_0995 Name: fbp Funciton: fructose-bisphosphatase
	STACA0001_0995	fbp	fructose-bisphosphatase
Position: -144 Score: 4.3 Sequence: ATGAATGCGGTTGCAA Locus tag: STACA0001_0829 Name: fbaA Funciton: fructose-1,6-bisphosphate aldolase
	STACA0001_0829	fbaA	fructose-1,6-bisphosphate aldolase
Position: -43 Score: 4.4 Sequence: GTGAAAGCCATTTCAT Locus tag: STACA0001_0589 Name: citZ Funciton: citrate synthase Locus tag: STACA0001_0588 Name: citC Funciton: isocitrate dehydrogenase
	STACA0001_0589	citZ	citrate synthase
	STACA0001_0588	citC	isocitrate dehydrogenase
Position: -151 Score: 4.7 Sequence: TGGAAAGCGCTTACAA Locus tag: STACA0001_1804 Name: citM Funciton: citrate/H+ symporter, CitMHS family
	STACA0001_1804	citM	citrate/H+ symporter, CitMHS family
Position: -103 Score: 4.4 Sequence: AATAAAGCGTTTTCTA Locus tag: STACA0001_1597 Name: citB Funciton: aconitate hydratase
	STACA0001_1597	citB	aconitate hydratase
Position: -26 Score: 4.3 Sequence: AATGAAACGCTTACAA Locus tag: STACA0001_0629 Name: ccpA Funciton: catabolite control protein A
	STACA0001_0629	ccpA	catabolite control protein A
Position: -93 Score: 5.1 Sequence: ATGAAAtCGCTTTCAa Locus tag: STACA0001_1845 Name: arcA Funciton: arginine deiminase Locus tag: STACA0001_1844 Name: arcB Funciton: ornithine carbamoyltransferase Locus tag: STACA0001_1843 Name: arcD Funciton: arginine/ornithine antiporter Locus tag: STACA0001_1842 Name: arcC Funciton: carbamate kinase Locus tag: STACA0001_1841 Name: arcR Funciton: transcription regulator of arginine catabolism, Crp/Fnr family
	STACA0001_1845	arcA	arginine deiminase
	STACA0001_1844	arcB	ornithine carbamoyltransferase
	STACA0001_1843	arcD	arginine/ornithine antiporter
	STACA0001_1842	arcC	carbamate kinase
	STACA0001_1841	arcR	transcription regulator of arginine catabolism, Crp/Fnr family
Position: -51 Score: 4.6 Sequence: ATGCAAGCGTATACAT Locus tag: STACA0001_0865 Name: arg Funciton: arginase
	STACA0001_0865	arg	arginase
Position: -170 Score: 4.2 Sequence: TTGGAAACGCTTTCTG Locus tag: STACA0001_0084 Name: lip Funciton: triacylglycerol lipase precursor
	STACA0001_0084	lip	triacylglycerol lipase precursor
Position: -73 Score: 4.6 Sequence: ATGATAAGGCTTTCAT Locus tag: STACA0001_0483 Name: kbl Funciton: 2-amino-3-ketobutyrate coenzyme A ligase
	STACA0001_0483	kbl	2-amino-3-ketobutyrate coenzyme A ligase
Position: -57 Score: 4.6 Sequence: ATGAAAACGTATACTT Locus tag: STACA0001_1368 Name: hutH Funciton: histidine ammonia-lyase
	STACA0001_1368	hutH	histidine ammonia-lyase
Position: -166 Score: 4 Sequence: TTGTAACCGTTTTCGC Locus tag: STACA0001_1003 Name: gudP Funciton: glucarate transporter
	STACA0001_1003	gudP	glucarate transporter
Position: -84 Score: 4.5 Sequence: TTGTAAACCCTTTAAA Position: -41 Score: 4.3 Sequence: TTGAAAGCGAAATCAT Locus tag: STACA0001_0168 Name: gudB Funciton: NAD-specific glutamate dehydrogenase
	STACA0001_0168	gudB	NAD-specific glutamate dehydrogenase
Position: -83 Score: 4.7 Sequence: AAGAAAGCGCTTGCAA Locus tag: STACA0001_1009 Name: gntR Funciton: gluconate operon transcriptional repressor Locus tag: STACA0001_1010 Name: gntK Funciton: gluconokinase Locus tag: STACA0001_1011 Name: gntP Funciton: gluconate permease
	STACA0001_1009	gntR	gluconate operon transcriptional repressor
	STACA0001_1010	gntK	gluconokinase
	STACA0001_1011	gntP	gluconate permease
Position: -115 Score: 5 Sequence: TAGTAAACGCTTACAT Locus tag: STACA0001_1165 Name: glvR Funciton: transcriptional regulator of maltose utilization, RpiR family
	STACA0001_1165	glvR	transcriptional regulator of maltose utilization, RpiR family
Position: -113 Score: 5 Sequence: ATGTAAGCGTTTACTA Locus tag: STACA0001_1166 Name: glvC Funciton: maltose-specific enzyme IICB of PTS system
	STACA0001_1166	glvC	maltose-specific enzyme IICB of PTS system
Position: -44 Score: 5 Sequence: ATGTAAAGGCTTACAT Locus tag: STACA0001_0678 Name: pckA Funciton: phosphoenolpyruvate carboxykinase
	STACA0001_0678	pckA	phosphoenolpyruvate carboxykinase
Position: -61 Score: 4.3 Sequence: ATGTTAGCGCGTTCAT Locus tag: STACA0001_0514 Name: nupC Funciton: pyrimidine nucleoside transporter
	STACA0001_0514	nupC	pyrimidine nucleoside transporter
Position: -121 Score: 4.3 Sequence: TGTAAAACGCTTACAT Locus tag: STACA0001_0950 Name: mvaS Funciton: 3-hydroxy-3-methylglutaryl CoA synthase
	STACA0001_0950	mvaS	3-hydroxy-3-methylglutaryl CoA synthase
Position: -137 Score: 4.3 Sequence: ATGTAAGCGTTTTACA Locus tag: STACA0001_0951 Name: mvaA Funciton: hydroxymethylglutaryl-CoA reductase
	STACA0001_0951	mvaA	hydroxymethylglutaryl-CoA reductase
Position: -93 Score: 4.7 Sequence: TAGAAAGCGCTTTAAT Locus tag: STACA0001_1121 Name: mqo Funciton: malate:quinone oxidoreductase
	STACA0001_1121	mqo	malate:quinone oxidoreductase
Position: -48 Score: 4.5 Sequence: TAGTAAGCGTTTTCCT Locus tag: STACA0001_1505 Name: manR Funciton: antiterminator for mannose operon, BglG family
	STACA0001_1505	manR	antiterminator for mannose operon, BglG family
Position: -40 Score: 4.6 Sequence: TTGAATACGCTTACAC Locus tag: STACA0001_1506 Name: manP Funciton: PTS system mannose-specific EIIBCA component Locus tag: STACA0001_1507 Name: manA Funciton: mannose-6-phosphate isomerase, class I
	STACA0001_1506	manP	PTS system mannose-specific EIIBCA component
	STACA0001_1507	manA	mannose-6-phosphate isomerase, class I
Position: -63 Score: 4.5 Sequence: TTGTAAACGTTTAATA Locus tag: STACA0001_1175 Name: SA0184 Funciton: hypothetical protein Locus tag: STACA0001_1174 Name: murQ Funciton: N-acetylmuramic acid 6-phosphate etherase Locus tag: STACA0001_1173 Name: murT Funciton: predicted N-acetylmuramate PTS system, IIBC components Locus tag: STACA0001_1172 Name: murR Funciton: predicted N-acetylmuramate-6-phosphate-responsive transcriptional regulator, RpiR family
	STACA0001_1175	SA0184	hypothetical protein
	STACA0001_1174	murQ	N-acetylmuramic acid 6-phosphate etherase
	STACA0001_1173	murT	predicted N-acetylmuramate PTS system, IIBC components
	STACA0001_1172	murR	predicted N-acetylmuramate-6-phosphate-responsive transcriptional regulator, RpiR family
Position: -128 Score: 4.7 Sequence: ATGTAAGCGATTGCAA Locus tag: STACA0001_0943 Name: rocA Funciton: 1-pyrroline-5-carboxylate dehydrogenase
	STACA0001_0943	rocA	1-pyrroline-5-carboxylate dehydrogenase
Position: -184 Score: 4.9 Sequence: TTGTAAGGGCTTTCAA Locus tag: STACA0001_0169 Name: rocD Funciton: ornithine aminotransferase
	STACA0001_0169	rocD	ornithine aminotransferase
Position: -84 Score: 4 Sequence: GTGTAAGCGTATACAG Locus tag: STACA0001_0973 Name: rbsU Funciton: ribose transporter RbsU Locus tag: STACA0001_0974 Name: rbsD Funciton: ribose permease Locus tag: STACA0001_0975 Name: rbsK Funciton: ribokinase
	STACA0001_0973	rbsU	ribose transporter RbsU
	STACA0001_0974	rbsD	ribose permease
	STACA0001_0975	rbsK	ribokinase
Position: -134 Score: 4.5 Sequence: GAGTAAGCGCTTTCTA Locus tag: STACA0001_1955 Name: putP Funciton: high affinity proline permease
	STACA0001_1955	putP	high affinity proline permease
Position: -81 Score: 4.7 Sequence: ATGTAAACGCTTTCTC Locus tag: STACA0001_0658 Name: putA Funciton: proline dehydrogenase
	STACA0001_0658	putA	proline dehydrogenase
Position: -168 Score: 4.6 Sequence: AATAAAACGTTTACAT Position: -48 Score: 4.3 Sequence: ATGAAAAGCATTTCAA Locus tag: STACA0001_0618 Name: ptaA Funciton: PTS system N-acetylglucosamine-specific IIBC component Locus tag: STACA0001_0617 Name: SE1402 Funciton: hypothetical hydrolase
	STACA0001_0618	ptaA	PTS system N-acetylglucosamine-specific IIBC component
	STACA0001_0617	SE1402	hypothetical hydrolase
Position: -221 Score: 4.2 Sequence: ATAATAGCGTTTACAT Position: -68 Score: 4.8 Sequence: TTGAAATCGCTTTCTT Locus tag: STACA0001_0978 Name: pfoR Funciton: rputative PTS transporter Locus tag: STACA0001_0979 Name: sdaAB Funciton: L-serine dehydratase beta chain Locus tag: STACA0001_0980 Name: sdaAA Funciton: L-serine dehydratase alpha chain
	STACA0001_0978	pfoR	rputative PTS transporter
	STACA0001_0979	sdaAB	L-serine dehydratase beta chain
	STACA0001_0980	sdaAA	L-serine dehydratase alpha chain
Position: -107 Score: 4.8 Sequence: TTTAAAACGTTTACAT Locus tag: STACA0001_0592 Name: pfkA Funciton: 6-phosphofructokinase Locus tag: STACA0001_0591 Name: pykA Funciton: pyruvate kinase
	STACA0001_0592	pfkA	6-phosphofructokinase
	STACA0001_0591	pykA	pyruvate kinase
Position: -62 Score: 5 Sequence: TTGAAAACGATTTCAA Locus tag: STACA0001_1305 Name: SAS074 Funciton: hypothetical protein
	STACA0001_1305	SAS074	hypothetical protein
Position: -119 Score: 4.5 Sequence: GTGTAATCGATTTCAT Locus tag: STACA0001_1171 Name: null Funciton: probable amino-acid or metabolite transporter
	STACA0001_1171		probable amino-acid or metabolite transporter
Position: -131 Score: 5 Sequence: TTGTAAGCGTTTTCTA Locus tag: STACA0001_1178 Name: SA2105 Funciton: hypothetical protein
	STACA0001_1178	SA2105	hypothetical protein
Position: -131 Score: 5 Sequence: TTGAAATCGTTTTCAA Locus tag: STACA0001_1306 Name: SA1975 Funciton: predicted membrane-bound hydrolase Locus tag: STACA0001_1307 Name: SA1974 Funciton: UDP-N-acetylglucosamine pyrophosphorylase Locus tag: STACA0001_1308 Name: SA1973 Funciton: hemolysin III
	STACA0001_1306	SA1975	predicted membrane-bound hydrolase
	STACA0001_1307	SA1974	UDP-N-acetylglucosamine pyrophosphorylase
	STACA0001_1308	SA1973	hemolysin III
Position: -30 Score: 4.8 Sequence: ATGAAAGCGCTTGCTT Locus tag: STACA0001_1569 Name: SA1162 Funciton: hypothetical protein
	STACA0001_1569	SA1162	hypothetical protein
Position: -62 Score: 4.4 Sequence: AAGTAACGGTTTTCAA Locus tag: STACA0001_0121 Name: SA0873 Funciton: DJ-1/PfpI family protein
	STACA0001_0121	SA0873	DJ-1/PfpI family protein
Position: -98 Score: 4.4 Sequence: AAGAAAGCGCTTTTAT Locus tag: STACA0001_0477 Name: SA0511 Funciton: uncharacterized epimerase/dehydratase
	STACA0001_0477	SA0511	uncharacterized epimerase/dehydratase

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of CcpA in Staphylococcus capitis SK14

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --