Regulon of ArgR in Staphylococcus carnosus subsp. carnosus TM300
| Regulator type: | Transcription factor |
| TF locus tag: | Sca_1144 |
| Regulator family: | ArgR |
| Regulation mode: | repressor |
| Biological process: | Arginine biosynthesis; Arginine degradation |
| Effector: | Arginine |
| Regulog: | ArgR - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By trascription factor - ArgR
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
- By pathway - Arginine degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -282
Score: 4.9 Sequence: AAGAATAATTATACAA
Position: -176
Score: 5.1 Sequence: ATATATATTTATTCAT
Position: -132
Score: 4.5 Sequence: TTGCATTATTATAAAT
Locus tag: Sca_2165
Name: cudT Funciton: choline transporter |
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cudT
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choline transporter
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Position: -56
Score: 4.4 Sequence: TTGCATATTAATACGT
Position: -36
Score: 4.2 Sequence: ATGTATAATAATTCTG
Locus tag: Sca_1432
Name: artPQ Funciton: Arginine ABC transporter, substrate-binding and permease protein
Locus tag: Sca_1431
Name: artM Funciton: Arginine ABC transporter, ATP-binding protein |
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artPQ
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Arginine ABC transporter, substrate-binding and permease protein
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artM
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Arginine ABC transporter, ATP-binding protein
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Position: -34
Score: 5.3 Sequence: ATGTATAAATATTCGT
Locus tag: Sca_1144
Name: argR Funciton: arginine repressor
Locus tag: Sca_1143
Name: recN Funciton: DNA repair protein |
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argR
|
arginine repressor
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recN
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DNA repair protein
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Position: -99
Score: 4.3 Sequence: TTGTATATTTATGTAA
Locus tag: Sca_0569
Name: argG Funciton: argininosuccinate synthase
Locus tag: Sca_0568
Name: argH Funciton: argininosuccinate lyase |
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argG
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argininosuccinate synthase
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argH
|
argininosuccinate lyase
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Position: -314
Score: 4.8 Sequence: ATAAATTAATATTCAT
Locus tag: Sca_2085
Name: arcA Funciton: arginine deiminase
Locus tag: Sca_2084
Name: arcD Funciton: arginine/ornithine antiporter
Locus tag: Sca_2083
Name: arcR Funciton: transcription regulator of arginine catabolism, Crp/Fnr family |
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arcA
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arginine deiminase
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arcD
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arginine/ornithine antiporter
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arcR
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transcription regulator of arginine catabolism, Crp/Fnr family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |