Regulon of NanR in Staphylococcus carnosus subsp. carnosus TM300
| Regulator type: | Transcription factor |
| TF locus tag: | Sca_2391 |
| Regulator family: | RpiR |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylmannosamine-6-phosphate |
| Regulog: | NanR - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - RpiR
- By effector - N-acetylmannosamine-6-phosphate
- By pathway - Sialic acid utilization
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -86
Score: 6.3 Sequence: ATGAAAATAATTTTCAA
Locus tag: Sca_2390
Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) |
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nanK
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N-acetylmannosamine kinase (EC 2.7.1.60)
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Position: -124
Score: 6.3 Sequence: ATGAAAATTTTTTTCAA
Locus tag: Sca_2392
Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: Sca_2393
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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nanE
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N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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Position: -58
Score: 6.3 Sequence: TTGAAAAAAATTTTCAT
Locus tag: Sca_2391
Name: nanR Funciton: Sialic acid utilization regulator NanR, RpiR family |
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nanR
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Sialic acid utilization regulator NanR, RpiR family
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Position: -176
Score: 6.3 Sequence: TTGAAAATTATTTTCAT
Locus tag: Sca_2389
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: Sca_2388
Name: nanT Funciton: N-Acetylneuraminic acid permease |
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nanA
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N-acetylneuraminate lyase (EC 4.1.3.3)
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nanT
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N-Acetylneuraminic acid permease
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |