Regulon of HTCS_Ara-2 in Bacteroides ovatus ATCC 8483
| Regulator type: | Transcription factor |
| TF locus tag: | BACOVA_02667 |
| Regulator family: | [Other] |
| Regulation mode: | activator (repressor) |
| Biological process: | Arabinan utilization |
| Effector: | Pectic galactan |
| Regulog: | HTCS_Ara-2 - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - Pectic galactan
- By pathway - Arabinan utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -76
Score: 8.5 Sequence: TGAACGATTT-(12)-TAAAATATTT
Locus tag: BACOVA_02667
Name: HTCS_Ara-2 Funciton: Arabinan utilization hybrid two-component system, HTH AraC family |
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HTCS_Ara-2
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Arabinan utilization hybrid two-component system, HTH AraC family
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Position: -50
Score: 8 Sequence: TGTATGTTTT-(11)-TGTGTGATTT
Locus tag: BACOVA_02661
Name: abnX Funciton: Putabtive arabinosidase, GH30 family |
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abnX
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Putabtive arabinosidase, GH30 family
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Position: -113
Score: 9.7 Sequence: TGCATGATTT-(12)-TGCATGATTT
Locus tag: BACOVA_02665
Name: susC_Ara-5 Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharideshypothetical protein
Locus tag: BACOVA_02664
Name: susD_Ara-5 Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BACOVA_02663
Name: BACOVA_02663 Funciton: Hypothetical protein, presumably involved in arabinan utilization |
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susC_Ara-5
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TonB-dependent outer membrane transporter of arabinan oligosaccharideshypothetical protein
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susD_Ara-5
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Outer membrane polysaccharide binding protein for arabinan oligosaccharides
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BACOVA_02663
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Hypothetical protein, presumably involved in arabinan utilization
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |