Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TPP in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process:
Effector:
Regulog: TPP - Alteromonadales
Under regulation:
- Genes 10
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -160
Score: 73.8
Sequence: ACGCTATACCAAGGG...
Locus tag: MADE_02805
Name: omp_thi
Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent
Locus tag: MADE_02804
Name: ykoF
Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
Locus tag: MADE_02803
Name: pnuT
Funciton: Predicted thiamin transporter PnuT
Locus tag: MADE_02802
Name: PF01636
Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
omp_thi
predicted thiamin-specific outer membrane transporter, TonB-dependent
ykoF
Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
pnuT
Predicted thiamin transporter PnuT
PF01636
Putative thiamine kinase, PnuT-associated, THI-regulated

Position: -361
Score: 77.2
Sequence: AAATTACTTGTCGGA...
Locus tag: MADE_00146
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: MADE_00145
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: MADE_00144
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: MADE_00143
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: MADE_00142
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: MADE_00141
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC
Thiamin biosynthesis protein ThiC
thiDE
Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiF
Sulfur carrier protein adenylyltransferase ThiF
thiS
Sulfur carrier protein ThiS
thiG
Thiazole biosynthesis protein ThiG
thiH
2-iminoacetate synthase (EC 1.3.99.n2)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD