Regulon of TPP in Alteromonas macleodii 'Deep ecotype'
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Regulog: | TPP - Alteromonadales |
| Under regulation: | |
| - Genes | 10 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Alteromonadales
- By RNA motif - TPP
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -160
Score: 73.8 Sequence: ACGCTATACCAAGGG...
Locus tag: MADE_02805
Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent
Locus tag: MADE_02804
Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
Locus tag: MADE_02803
Name: pnuT Funciton: Predicted thiamin transporter PnuT
Locus tag: MADE_02802
Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated |
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omp_thi
|
predicted thiamin-specific outer membrane transporter, TonB-dependent
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ykoF
|
Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
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pnuT
|
Predicted thiamin transporter PnuT
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PF01636
|
Putative thiamine kinase, PnuT-associated, THI-regulated
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Position: -361
Score: 77.2 Sequence: AAATTACTTGTCGGA...
Locus tag: MADE_00146
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: MADE_00145
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: MADE_00144
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: MADE_00143
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: MADE_00142
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: MADE_00141
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
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thiC
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Thiamin biosynthesis protein ThiC
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thiDE
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Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiF
|
Sulfur carrier protein adenylyltransferase ThiF
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thiS
|
Sulfur carrier protein ThiS
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thiG
|
Thiazole biosynthesis protein ThiG
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thiH
|
2-iminoacetate synthase (EC 1.3.99.n2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |