Regulon of TPP in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:
Effector:
Regulog:	TPP - Alteromonadales
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Alteromonadales
By RNA motif - TPP

Regulated operons
	Locus Tag	Name	Function
Position: -160 Score: 73.8 Sequence: ACGCTATACCAAGGG... Locus tag: MADE_02805 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: MADE_02804 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: MADE_02803 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: MADE_02802 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
	MADE_02805	omp_thi	predicted thiamin-specific outer membrane transporter, TonB-dependent
	MADE_02804	ykoF	Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
	MADE_02803	pnuT	Predicted thiamin transporter PnuT
	MADE_02802	PF01636	Putative thiamine kinase, PnuT-associated, THI-regulated
Position: -361 Score: 77.2 Sequence: AAATTACTTGTCGGA... Locus tag: MADE_00146 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: MADE_00145 Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: MADE_00144 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: MADE_00143 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: MADE_00142 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: MADE_00141 Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
	MADE_00146	thiC	Thiamin biosynthesis protein ThiC
	MADE_00145	thiDE	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	MADE_00144	thiF	Sulfur carrier protein adenylyltransferase ThiF
	MADE_00143	thiS	Sulfur carrier protein ThiS
	MADE_00142	thiG	Thiazole biosynthesis protein ThiG
	MADE_00141	thiH	2-iminoacetate synthase (EC 1.3.99.n2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD