Regulon of TPP in Pseudoalteromonas atlantica T6c

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:
Effector:
Regulog:	TPP - Alteromonadales
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Alteromonadales
By RNA motif - TPP

Regulated operons
	Locus Tag	Name	Function
Position: -178 Score: 63.6 Sequence: TAACTACCAAGGGGT... Locus tag: Patl_1344 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: Patl_1345 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: Patl_1346 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: Patl_1347 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
	Patl_1344	omp_thi	predicted thiamin-specific outer membrane transporter, TonB-dependent
	Patl_1345	ykoF	Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
	Patl_1346	pnuT	Predicted thiamin transporter PnuT
	Patl_1347	PF01636	Putative thiamine kinase, PnuT-associated, THI-regulated
Position: -155 Score: 69.5 Sequence: ACTCGCTCTCGGGGC... Locus tag: Patl_1931 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: Patl_1932 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: Patl_1933 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Patl_1934 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: Patl_1935 Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: Patl_1936 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF/Rhodanese-like
	Patl_1931	thiC	Thiamin biosynthesis protein ThiC
	Patl_1932	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	Patl_1933	thiS	Sulfur carrier protein ThiS
	Patl_1934	thiG	Thiazole biosynthesis protein ThiG
	Patl_1935	thiDE	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Patl_1936	thiF	Sulfur carrier protein adenylyltransferase ThiF/Rhodanese-like

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD