Regulon of HTCS_Rgu-1 in Bacteroides vulgatus ATCC 8482

Properties
Regulator type:	Transcription factor
TF locus tag:	BVU_1816
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By effector - Rhamogalacturonate oligosaccharides
By effector - Galacturonate oligosaccharides
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -106 Score: 8.9 Sequence: TAAAATATACGA-(9)-CAAATATTACAA Locus tag: BVU_1813 Name: plyC4 Funciton: Pectate lyase C Locus tag: BVU_1814 Name: ytaP Funciton: Predicted hydrolase Locus tag: BVU_1815 Name: pemB Funciton: Pectinesterase (EC 3.1.1.11)
	BVU_1813	plyC4	Pectate lyase C
	BVU_1814	ytaP	Predicted hydrolase
	BVU_1815	pemB	Pectinesterase (EC 3.1.1.11)
Position: -105 Score: 9.4 Sequence: CAAATAATACAC-(9)-TGAAAAGTGCAC Locus tag: BVU_1797 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BVU_1798 Name: rgaE Funciton: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
	BVU_1797	rhiN	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	BVU_1798	rgaE	Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
Position: -123 Score: 9 Sequence: TAATAAATCCAC-(9)-TAAAAACTACAC Locus tag: BVU_1799 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BVU_1800 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
	BVU_1799	susC_Rgu-1	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
	BVU_1800	susD_Rgu-1	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
Position: -237 Score: 9.5 Sequence: CAAAAAATCCAC-(9)-CAAATAGTGCAC Locus tag: BVU_1985 Name: pehX1 Funciton: Polygalacturonase (EC 3.2.1.15 ) Locus tag: BVU_1984 Name: GH88 Funciton: Glycosyl hydrolase, family 88 Locus tag: BVU_1983 Name: xylB Funciton: xylosidase/arabinosidase
	BVU_1985	pehX1	Polygalacturonase (EC 3.2.1.15 )
	BVU_1984	GH88	Glycosyl hydrolase, family 88
	BVU_1983	xylB	xylosidase/arabinosidase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD