Regulon of HTCS_Rgu-1 in Bacteroides ovatus ATCC 8483

Properties
Regulator type:	Transcription factor
TF locus tag:	BACOVA_04904, BACOVA_04931
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Statistics of regulated genes:
- Genes	11
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By effector - Rhamogalacturonate oligosaccharides
By effector - Galacturonate oligosaccharides
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -155 Score: 8.9 Sequence: CAAAAAATGCAC-(9)-TAAAAAATCCCA Locus tag: BACOVA_04900 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BACOVA_04901 Name: rgaE Funciton: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
	BACOVA_04900	rhiN	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	BACOVA_04901	rgaE	Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
Position: -128 Score: 9.5 Sequence: CAAAAAATACGA-(9)-CAAATATTGCAC Locus tag: BACOVA_04911 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACOVA_04910 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BACOVA_04909 Name: BT4112 Funciton: Predicted pectin lyase Locus tag: BACOVA_04908 Name: pemC Funciton: Pectinesterase (EC 3.1.1.11) Locus tag: BACOVA_04907 Name: plyC1 Funciton: Pectate lyase C Locus tag: BACOVA_04906 Name: plyC1 Funciton: Pectate lyase C Locus tag: BACOVA_04905 Name: plyC1 Funciton: Pectate lyase C
	BACOVA_04911	susC_Rgu-1	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
	BACOVA_04910	susD_Rgu-1	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
	BACOVA_04909	BT4112	Predicted pectin lyase
	BACOVA_04908	pemC	Pectinesterase (EC 3.1.1.11)
	BACOVA_04907	plyC1	Pectate lyase C
	BACOVA_04906	plyC1	Pectate lyase C
	BACOVA_04905	plyC1	Pectate lyase C
Position: -267 Score: 9 Sequence: CAAAAAATACAC-(9)-CAATTAGTCCAC Locus tag: BACOVA_05040 Name: pehX1 Funciton: Polygalacturonase (EC 3.2.1.15 ) Locus tag: BACOVA_05039 Name: GH88 Funciton: Glycosyl hydrolase, family 88
	BACOVA_05040	pehX1	Polygalacturonase (EC 3.2.1.15 )
	BACOVA_05039	GH88	Glycosyl hydrolase, family 88

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD