Regulon of HTCS_Rgu-1 in Bacteroides cellulosilyticus DSM 14838

Properties
Regulator type:	Transcription factor
TF locus tag:	BACCELL_03130, BACCELL_03129
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Statistics of regulated genes:
- Genes	6
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By effector - Rhamogalacturonate oligosaccharides
By effector - Galacturonate oligosaccharides
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -273 Score: 8.8 Sequence: CAAAAAATCCAC-(9)-CAAATTGTGCAC Locus tag: BACCELL_03143 Name: pehX1 Funciton: Polygalacturonase (EC 3.2.1.15 )
	BACCELL_03143	pehX1	Polygalacturonase (EC 3.2.1.15 )
Position: -106 Score: 9.3 Sequence: TAAATAATGCAC-(9)-CGAAAAGTACAC Locus tag: BACCELL_03119 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BACCELL_03120 Name: rgaE Funciton: Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
	BACCELL_03119	rhiN	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	BACCELL_03120	rgaE	Rhamnogalacturonan acetylesterase (EC 3.1.1.86)
Position: -126 Score: 9 Sequence: CAAAAAATACCA-(9)-CAGATATTACAC Locus tag: BACCELL_03135 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACCELL_03134 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BACCELL_03133 Name: BT4112 Funciton: Predicted pectin lyase
	BACCELL_03135	susC_Rgu-1	TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
	BACCELL_03134	susD_Rgu-1	Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
	BACCELL_03133	BT4112	Predicted pectin lyase

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD