Regulon of ArgR in Clostridium novyi NT
| Regulator type: | Transcription factor |
| TF locus tag: | NT01CX_1986 |
| Regulator family: | ArgR |
| Regulation mode: | repressor |
| Biological process: | Arginine biosynthesis |
| Effector: | Arginine |
| Regulog: | ArgR - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By trascription factor - ArgR
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -132
Score: 5 Sequence: TTGAATAATTATACTA
Position: -59
Score: 4.9 Sequence: TTGAATAATTATGCTT
Locus tag: NT01CX_2379
Name: argC Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Locus tag: NT01CX_2378
Name: argJ Funciton: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
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argC
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N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
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argJ
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Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
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Position: -77
Score: 5.3 Sequence: ATGTATAAATATGAAA
Position: -57
Score: 5.1 Sequence: ATGTATAAAAATTCAA
Locus tag: NT01CX_0383
Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: NT01CX_0382
Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
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carA
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Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
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carB
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Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
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Position: -92
Score: 5.2 Sequence: TTGTATTATTATAAAT
Position: -72
Score: 5.3 Sequence: ATGCATAAATATAAAA
Locus tag: NT01CX_1828
Name: argT Funciton: Predicted arginine uptake transporter |
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argT
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Predicted arginine uptake transporter
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Position: -267
Score: 4.6 Sequence: TTTTAAAAATATGCAA
Position: -115
Score: 5 Sequence: GTGTATAAATATAAAT
Position: -84
Score: 4.8 Sequence: ATACATAAATATTCAT
Position: -61
Score: 5.4 Sequence: TTGCATAATTATAAAT
Locus tag: NT01CX_0932
Name: artP Funciton: Arginine ABC transporter, substrate-binding protein
Locus tag: NT01CX_0933
Name: artQ Funciton: Arginine ABC transporter, permease protein
Locus tag: NT01CX_0934
Name: artM Funciton: Arginine ABC transporter, ATP-binding protein |
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artP
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Arginine ABC transporter, substrate-binding protein
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artQ
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Arginine ABC transporter, permease protein
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artM
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Arginine ABC transporter, ATP-binding protein
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Position: -254
Score: 5.1 Sequence: ATATATAATTATAAAA
Position: -232
Score: 4.5 Sequence: ATGTATAATAATACTG
Position: -158
Score: 4.8 Sequence: TTGTATATGTATAAAA
Position: -138
Score: 5.3 Sequence: TTGAATAAATATTCAT
Position: -115
Score: 4.8 Sequence: TTGCATAATTATAATA
Position: -95
Score: 5.1 Sequence: ATGTATAATTATTTAT
Position: -10
Score: 4.9 Sequence: GTGTATAAATATGAAA
Locus tag: NT01CX_0138
Name: artP2 Funciton: Arginine ABC transporter, substrate-binding protein
Locus tag: NT01CX_0137
Name: artQ2 Funciton: Arginine ABC transporter, permease protein
Locus tag: NT01CX_0136
Name: artM2 Funciton: Arginine ABC transporter, ATP-binding protein
Locus tag: NT01CX_0135
Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: NT01CX_0134
Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1) |
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artP2
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Arginine ABC transporter, substrate-binding protein
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artQ2
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Arginine ABC transporter, permease protein
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artM2
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Arginine ABC transporter, ATP-binding protein
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argG
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Argininosuccinate synthase (EC 6.3.4.5)
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argH
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Argininosuccinate lyase (EC 4.3.2.1)
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Position: -102
Score: 4.9 Sequence: AAGCATAATTATTCAA
Position: -29
Score: 5 Sequence: TAGTATAATTATTCAA
Locus tag: NT01CX_2380
Name: argB Funciton: Acetylglutamate kinase (EC 2.7.2.8)
Locus tag: NT01CX_2381
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) |
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argB
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Acetylglutamate kinase (EC 2.7.2.8)
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argD
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Acetylornithine aminotransferase (EC 2.6.1.11)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |