Regulon of AlsR in Citrobacter koseri ATCC BAA-895
| Regulator type: | Transcription factor |
| TF locus tag: | CKO_03784 |
| Regulator family: | RpiR |
| Regulation mode: | repressor |
| Biological process: | Allose utilization |
| Effector: | D-allose |
| Regulog: | AlsR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - RpiR
- By effector - D-allose
- By pathway - Allose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -56
Score: 4.4 Sequence: GGCCTGTTCTACACACC
Position: -1
Score: 4.1 Sequence: AATGAGTCAGTCAGAAT
Locus tag: CKO_03783
Name: null Funciton: hypothetical protein
Locus tag: CKO_03784
Name: alsR Funciton: Transcriptional regulator of D-allose utilization, RpiR family
Locus tag: CKO_03785
Name: alsB Funciton: D-allose ABC transporter, substrate-binding component
Locus tag: CKO_03786
Name: alsA Funciton: D-allose ABC transporter, ATPase component
Locus tag: CKO_03787
Name: alsC Funciton: D-allose ABC transporter, permease component
Locus tag: CKO_03788
Name: alsE Funciton: D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
Locus tag: CKO_03789
Name: alsK Funciton: D-allose kinase (EC 2.7.1.55) |
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hypothetical protein
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alsR
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Transcriptional regulator of D-allose utilization, RpiR family
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alsB
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D-allose ABC transporter, substrate-binding component
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alsA
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D-allose ABC transporter, ATPase component
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alsC
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D-allose ABC transporter, permease component
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alsE
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D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
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alsK
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D-allose kinase (EC 2.7.1.55)
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Position: -106
Score: 4.4 Sequence: GGTGTGTAGAACAGGCC
Locus tag: CKO_03782
Name: rpiB Funciton: D-allose-6-phosphate isomerase (EC 5.3.1.-) / Ribose 5-phosphate isomerase B (EC 5.3.1.6) |
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rpiB
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D-allose-6-phosphate isomerase (EC 5.3.1.-) / Ribose 5-phosphate isomerase B (EC 5.3.1.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |