Regulon of Cobalamin in Burkholderia phymatum STM815
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Burkholderia |
| Under regulation: | |
| - Genes | 21 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Burkholderia
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -266
Score: 40.2 Sequence: CATAATACCCGTTCG...
Locus tag: Bphy_3143
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Bphy_3144
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Bphy_3145
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Bphy_3146
Name: cbiGH Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
|||
|
cobG
|
Cobalamin biosynthesis protein CobG
|
||
|
cbiC
|
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
|
||
|
cbiL
|
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
|
||
|
cbiGH
|
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
|
||
|
Position: -191
Score: 34.9 Sequence: GCAGTTTAGCGCGTA...
Locus tag: Bphy_3437
Name: bglu_2g19320 Funciton: hypothetical protein
Locus tag: Bphy_3436
Name: cbtA Funciton: Predicted cobalt transporter CbtA |
|||
|
bglu_2g19320
|
hypothetical protein
|
||
|
cbtA
|
Predicted cobalt transporter CbtA
|
||
|
Position: -466
Score: 30.5 Sequence: CTAAACTCGCACGCA...
Locus tag: Bphy_3153
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Bphy_3152
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bphy_3151
Name: chlI Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bphy_3150
Name: chlD Funciton: ChlD component of cobalt chelatase involved in B12 biosynthesis |
|||
|
cobW
|
CobW GTPase involved in cobalt insertion for B12 biosynthesis
|
||
|
cobN
|
CobN component of cobalt chelatase involved in B12 biosynthesis
|
||
|
chlI
|
ChlI component of cobalt chelatase involved in B12 biosynthesis
|
||
|
chlD
|
ChlD component of cobalt chelatase involved in B12 biosynthesis
|
||
|
Position: -319
Score: 41.5 Sequence: TCTACACTTGCGGCA...
Locus tag: Bphy_2213
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Bphy_2212
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bphy_2211
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bphy_2210
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bphy_2209
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bphy_2208
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
|||
|
btuB
|
Outer membrane vitamin B12 receptor BtuB
|
||
|
btuC
|
ABC-type cobalamin transport system, permease component
|
||
|
btuD
|
ABC-type cobalamin transport system, ATPase components
|
||
|
cobT
|
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
|
||
|
cobS
|
Cobalamin-5-phosphate synthase CobS
|
||
|
cobC
|
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
|
||
|
Position: -444
Score: 56.1 Sequence: ATCGTATGCGCGCGT...
Locus tag: Bphy_3154
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Bphy_3155
Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Bphy_3156
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Bphy_3157
Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase
Locus tag: Bphy_3158
Name: bluB Funciton: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
|||
|
cysG
|
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
|
||
|
cbiG
|
Cobalamin biosynthesis protein CbiG
|
||
|
btuR
|
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
|
||
|
cbiA
|
Cobyrinic acid A,C-diamide synthase
|
||
|
bluB
|
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |