Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Burkholderia phymatum STM815

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Burkholderia
Under regulation:
- Genes 21
- Operons 5
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -266
Score: 40.2
Sequence: CATAATACCCGTTCG...
Locus tag: Bphy_3143
Name: cobG
Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Bphy_3144
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Bphy_3145
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Bphy_3146
Name: cbiGH
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
cobG
Cobalamin biosynthesis protein CobG
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiGH
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase

Position: -191
Score: 34.9
Sequence: GCAGTTTAGCGCGTA...
Locus tag: Bphy_3437
Name: bglu_2g19320
Funciton: hypothetical protein
Locus tag: Bphy_3436
Name: cbtA
Funciton: Predicted cobalt transporter CbtA
bglu_2g19320
hypothetical protein
cbtA
Predicted cobalt transporter CbtA

Position: -466
Score: 30.5
Sequence: CTAAACTCGCACGCA...
Locus tag: Bphy_3153
Name: cobW
Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Bphy_3152
Name: cobN
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bphy_3151
Name: chlI
Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bphy_3150
Name: chlD
Funciton: ChlD component of cobalt chelatase involved in B12 biosynthesis
cobW
CobW GTPase involved in cobalt insertion for B12 biosynthesis
cobN
CobN component of cobalt chelatase involved in B12 biosynthesis
chlI
ChlI component of cobalt chelatase involved in B12 biosynthesis
chlD
ChlD component of cobalt chelatase involved in B12 biosynthesis

Position: -319
Score: 41.5
Sequence: TCTACACTTGCGGCA...
Locus tag: Bphy_2213
Name: btuB
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Bphy_2212
Name: btuC
Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bphy_2211
Name: btuD
Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bphy_2210
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bphy_2209
Name: cobS
Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bphy_2208
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
btuB
Outer membrane vitamin B12 receptor BtuB
btuC
ABC-type cobalamin transport system, permease component
btuD
ABC-type cobalamin transport system, ATPase components
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
cobS
Cobalamin-5-phosphate synthase CobS
cobC
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)

Position: -444
Score: 56.1
Sequence: ATCGTATGCGCGCGT...
Locus tag: Bphy_3154
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Bphy_3155
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Bphy_3156
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Bphy_3157
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
Locus tag: Bphy_3158
Name: bluB
Funciton: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
cysG
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
cbiG
Cobalamin biosynthesis protein CbiG
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
cbiA
Cobyrinic acid A,C-diamide synthase
bluB
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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