Regulon of Cobalamin in Burkholderia cepacia AMMD
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Burkholderia |
| Under regulation: | |
| - Genes | 15 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Burkholderia
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -402
Score: 113.2 Sequence: TACGCTTGCGCGCTG...
Locus tag: Bamb_3886
Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB |
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btuB1
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Outer membrane vitamin B12 receptor BtuB
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Position: -299
Score: 95.1 Sequence: CTACGGCCGTTCGTT...
Locus tag: Bamb_1574
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Bamb_1573
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Bamb_1572
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Bamb_1571
Name: cbiGH Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
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cobG
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Cobalamin biosynthesis protein CobG
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cbiC
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Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiL
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Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiGH
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Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
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Position: -177
Score: 37.2 Sequence: CGGGCCTTCAACACG...
Locus tag: Bamb_4649
Name: bglu_2g19320 Funciton: hypothetical protein
Locus tag: Bamb_4648
Name: cbtA Funciton: Predicted cobalt transporter CbtA |
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bglu_2g19320
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hypothetical protein
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cbtA
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Predicted cobalt transporter CbtA
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Position: -595
Score: 37 Sequence: ACACTCGCACGCGTT...
Locus tag: Bamb_1556
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Bamb_1557
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bamb_1558
Name: chlI Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Bamb_1559
Name: chlD Funciton: ChlD component of cobalt chelatase involved in B12 biosynthesis |
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cobW
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CobW GTPase involved in cobalt insertion for B12 biosynthesis
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cobN
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CobN component of cobalt chelatase involved in B12 biosynthesis
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chlI
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ChlI component of cobalt chelatase involved in B12 biosynthesis
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chlD
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ChlD component of cobalt chelatase involved in B12 biosynthesis
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Position: -272
Score: 33.8 Sequence: TATCGTATGCGCCGC...
Locus tag: Bamb_1554
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Bamb_1553
Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Bamb_1552
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Bamb_1551
Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase |
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cysG
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Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
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cbiG
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Cobalamin biosynthesis protein CbiG
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btuR
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Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
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cbiA
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Cobyrinic acid A,C-diamide synthase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |