Regulon of Cobalamin in Burkholderia mallei ATCC 23344
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Burkholderia |
| Under regulation: | |
| - Genes | 13 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Burkholderia
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -309
Score: 58.2 Sequence: TACAGCGTCCGTCGA...
Locus tag: BMA1161
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: BMA1162
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: BMA1163
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: BMA1164
Name: cbiGH Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase |
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cobG
|
Cobalamin biosynthesis protein CobG
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cbiC
|
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiL
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Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiGH
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Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
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Position: -571
Score: 37.8 Sequence: CGTTTCGGTGCTCGC...
Locus tag: BMA1172
Name: hoxN Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: BMA1171
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: BMA1170
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis |
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hoxN
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HoxN/HupN/NixA family cobalt transporter
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cobW
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CobW GTPase involved in cobalt insertion for B12 biosynthesis
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cobN
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CobN component of cobalt chelatase involved in B12 biosynthesis
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Position: -336
Score: 17.7 Sequence: TAAACTGGCGCCGCC...
Locus tag: BMA0685
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: BMA0686
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: BMA0687
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: BMA0688
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: BMA0689
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: BMA0690
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
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btuB
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Outer membrane vitamin B12 receptor BtuB
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btuC
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ABC-type cobalamin transport system, permease component
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btuD
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ABC-type cobalamin transport system, ATPase components
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cobT
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Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
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cobS
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Cobalamin-5-phosphate synthase CobS
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cobC
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Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |