Regulon of ykkC-yxkD in Pseudomonas mendocina ymp

Properties
Regulator type:	RNA regulatory element
Name:	ykkC-yxkD
RFAM:	RF00442
Regulation mode:
Biological process:	Multidrug resistance
Effector:
Regulog:	ykkC-yxkD - Pseudomonadaceae
Under regulation:
- Genes	7
- Operons	3

Member of regulog collections

By taxonomy - Pseudomonadaceae
By RNA motif - ykkC-yxkD
By pathway - Multidrug resistance

Regulated operons
	Locus Tag	Name	Function
Position: -172 Score: 76.2 Sequence: AGAAATGGCCGACTA... Locus tag: Pmen_1366 Name: uctB1 Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
	Pmen_1366	uctB1	Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
Position: -287 Score: 90.3 Sequence: GCCAATAGCCGGCTA... Locus tag: Pmen_1365 Name: uctP Funciton: Urea carboxylase-related ABC transporter, permease protein Locus tag: Pmen_1364 Name: uctA Funciton: Urea carboxylase-related ABC transporter, ATPase protein
	Pmen_1365	uctP	Urea carboxylase-related ABC transporter, permease protein
	Pmen_1364	uctA	Urea carboxylase-related ABC transporter, ATPase protein
Position: -168 Score: 95.4 Sequence: CGAAATGGATGACTA... Locus tag: Pmen_1361 Name: uctB1 Funciton: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Locus tag: Pmen_1360 Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: Pmen_1359 Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Locus tag: Pmen_1358 Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...
	Pmen_1361	uctB1	Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein
	Pmen_1360	amt1	Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
	Pmen_1359	amt2	Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
	Pmen_1358	ucaA	Urea carboxylase (EC 6.3.4.6) # [Carbamoyl-phosphate synthase large chain (EC 6.3.5.5), ATP binding domain/Biotin carboxylase (EC 6.3.4.14)/Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)/Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)/Biotin carboxyl ...

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD