Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GEMM_RNA_motif in Photobacterium profundum SS9

Properties
Regulator type: RNA regulatory element
Name: GEMM_RNA_motif
RFAM: RF01051
Regulation mode:
Biological process: Second messenger response
Effector: Cyclic diguanylate
Regulog: GEMM_RNA_motif - Vibrionales
Under regulation:
- Genes 3
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -187
Score: 80
Sequence: TATGTAAAGGGCAAA...
Locus tag: PBPRA2288
Name: tagA
Funciton: Lipoprotein, ToxR-activated gene, TagA
PBPRA2288
tagA
Lipoprotein, ToxR-activated gene, TagA
Position: -155
Score: 59.2
Sequence: CACATTGTTGGCAAA...
Locus tag: PBPRB0312
Name: cbp
Funciton: Chitin binding protein
PBPRB0312
cbp
Chitin binding protein
Position: -225
Score: 72.5
Sequence: ACGAAACAAGGCAAA...
Locus tag: PBPRA2110
Name: tfoX
Funciton: Positive regulator of competence TfoX
PBPRA2110
tfoX
Positive regulator of competence TfoX
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