Regulon of GEMM_RNA_motif in Photobacterium profundum SS9
| Regulator type: | RNA regulatory element |
| Name: | GEMM_RNA_motif |
| RFAM: | RF01051 |
| Regulation mode: | |
| Biological process: | Second messenger response |
| Effector: | Cyclic diguanylate |
| Regulog: | GEMM_RNA_motif - Vibrionales |
| Under regulation: | |
| - Genes | 3 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Vibrionales
- By RNA motif - GEMM_RNA_motif
- By effector - Cyclic diguanylate
- By pathway - Second messenger response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -187
Score: 80 Sequence: TATGTAAAGGGCAAA...
Locus tag: PBPRA2288
Name: tagA Funciton: Lipoprotein, ToxR-activated gene, TagA |
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tagA
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Lipoprotein, ToxR-activated gene, TagA
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Position: -155
Score: 59.2 Sequence: CACATTGTTGGCAAA...
Locus tag: PBPRB0312
Name: cbp Funciton: Chitin binding protein |
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cbp
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Chitin binding protein
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Position: -225
Score: 72.5 Sequence: ACGAAACAAGGCAAA...
Locus tag: PBPRA2110
Name: tfoX Funciton: Positive regulator of competence TfoX |
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tfoX
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Positive regulator of competence TfoX
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |