Regulon of RhaR in Chloroflexus aggregans DSM 9485

Properties
Regulator type:	Transcription factor
TF locus tag:	Cagg_3309
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaR - Chloroflexia
Statistics of regulated genes:
- Genes	9
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Chloroflexi
By TF family - DeoR
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -140 Score: 7.2 Sequence: TCGTAA-(4)-TCGAAA Position: -130 Score: 6.9 Sequence: TCGAAA-(4)-TTGACA Position: -120 Score: 6.7 Sequence: TTGACA-(4)-TTGAAA Locus tag: Cagg_3309 Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family Locus tag: Cagg_3310 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: Cagg_3311 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: Cagg_3312 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: Cagg_3313 Name: rhaF Funciton: L-rhamnose ABC transporter, duplicated periplasmic rhamnose-binding protein Locus tag: Cagg_3314 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: Cagg_3315 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: Cagg_3316 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: Cagg_3317 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
	Cagg_3309	rhaR	Transcriptional regulator of rhamnose utilization, DeoR family
	Cagg_3310	rhaG	L-rhamnose ABC transporter, duplicated ATP-binding component
	Cagg_3311	rhaH	L-rhamnose ABC transporter, permease component 1
	Cagg_3312	rhaJ	L-rhamnose ABC transporter, permease component 2
	Cagg_3313	rhaF	L-rhamnose ABC transporter, duplicated periplasmic rhamnose-binding protein
	Cagg_3314	rhaM	L-rhamnose mutarotase
	Cagg_3315	rhaA	L-rhamnose isomerase (EC 5.3.1.14)
	Cagg_3316	rhaEW	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
	Cagg_3317	rhaB	Rhamnulokinase (EC 2.7.1.5)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD