Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Paenibacillus sp. JDR-2

Properties
Regulator type: Transcription factor
TF locus tag: Pjdr2_3800
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Bacillales
Statistics of regulated genes:
- Genes 25
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 559 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -124
Score: 4.3
Sequence: ATCATAACGCTTTCAA
Locus tag: Pjdr2_3908
Name: yqgY
Funciton: Uncharacterized short membrane protein
Pjdr2_3908
yqgY
Uncharacterized short membrane protein
Position: -33
Score: 4.1
Sequence: AAGAAAGCGATTTTAT
Locus tag: Pjdr2_6226
Name: mtlA
Funciton: PTS family mannitol-permease II, BC component
Locus tag: Pjdr2_6225
Name: mtlR
Funciton: Mannitol operon activator, BglG family
Locus tag: Pjdr2_6224
Name: mtlF
Funciton: PTS mannitol-specific enzyme IIA component
Locus tag: Pjdr2_6223
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Pjdr2_6226
mtlA
PTS family mannitol-permease II, BC component
Pjdr2_6225
mtlR
Mannitol operon activator, BglG family
Pjdr2_6224
mtlF
PTS mannitol-specific enzyme IIA component
Pjdr2_6223
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Position: -77
Score: 4.1
Sequence: ATGAAAGCGAATACTC
Locus tag: Pjdr2_5571
Name: null
Funciton: Predicted oxidoreductase
Locus tag: Pjdr2_5570
Name: null
Funciton: Sugar ABC transporter, permease protein
Locus tag: Pjdr2_5569
Name: null
Funciton: Sugar ABC transporter, permease protein
Pjdr2_5571
Predicted oxidoreductase
Pjdr2_5570
Sugar ABC transporter, permease protein
Pjdr2_5569
Sugar ABC transporter, permease protein
Position: -236
Score: 4.5
Sequence: ATTATAGCGCTTACAA
Locus tag: Pjdr2_6054
Name: iolJ
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Pjdr2_6054
iolJ
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -41
Score: 4.6
Sequence: ATGTAAACACTTACAT
Locus tag: Pjdr2_3535
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: Pjdr2_3534
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: Pjdr2_3533
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
Pjdr2_3535
rhiL
Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Pjdr2_3534
rhiF
Putatuve rhamnogalacturonides ABC transporter, permease component 1
Pjdr2_3533
rhiG
Putatuve rhamnogalacturonides ABC transporter, permease component 2
Position: -35
Score: 4.7
Sequence: ATGAAAGCGGTTTTTT
Locus tag: Pjdr2_0664
Name: rbsB
Funciton: ABC-type sugar transport system, periplasmic component
Locus tag: Pjdr2_0665
Name: BH3447
Funciton: Two-component sensor histidine kinase
Locus tag: Pjdr2_0666
Name: BH3446
Funciton: DNA-binding response regulator, AraC family
Pjdr2_0664
rbsB
ABC-type sugar transport system, periplasmic component
Pjdr2_0665
BH3447
Two-component sensor histidine kinase
Pjdr2_0666
BH3446
DNA-binding response regulator, AraC family
Position: -56
Score: 5
Sequence: TTGAAAGCGTATTCTT
Locus tag: Pjdr2_3796
Name: acsA
Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Pjdr2_3796
acsA
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -8
Score: 4.6
Sequence: TTGTAAACGTGTTCAA
Locus tag: Pjdr2_0728
Name: null
Funciton: Predicted beta-xyloside ABC transporter, substrate-binding component
Locus tag: Pjdr2_0729
Name: null
Funciton: Predicted beta-xyloside ABC transporter, permease component
Locus tag: Pjdr2_0730
Name: null
Funciton: Predicted beta-xyloside ABC transporter, ATP-binding component
Pjdr2_0728
Predicted beta-xyloside ABC transporter, substrate-binding component
Pjdr2_0729
Predicted beta-xyloside ABC transporter, permease component
Pjdr2_0730
Predicted beta-xyloside ABC transporter, ATP-binding component
Position: -68
Score: 4.7
Sequence: TTGTAAGCGCAATCAG
Locus tag: Pjdr2_3019
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Pjdr2_3019
abfA
Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Position: -242
Score: 4.4
Sequence: ATGAATACGCTTTAAA
Locus tag: Pjdr2_4724
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Pjdr2_4725
Name: odhB
Funciton: 2-oxoglutarate dehydrogenase E2 component
Pjdr2_4724
odhA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Pjdr2_4725
odhB
2-oxoglutarate dehydrogenase E2 component
Position: 0
Score: 4.7
Sequence: ATGAAAGCGGTCACAA
Locus tag: Pjdr2_1934
Name: lplB
Funciton: Transmembrane lipoprotein
Locus tag: Pjdr2_1935
Name: lplC
Funciton: Polysaccharide ABC transporter permease
Locus tag: Pjdr2_1936
Name: ugpB
Funciton: ABC transporter, substrate-binding protein, putative
Pjdr2_1934
lplB
Transmembrane lipoprotein
Pjdr2_1935
lplC
Polysaccharide ABC transporter permease
Pjdr2_1936
ugpB
ABC transporter, substrate-binding protein, putative
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