Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Geobacillus kaustophilus HTA426

Properties
Regulator type: Transcription factor
TF locus tag: GK2810
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Bacillales
Statistics of regulated genes:
- Genes 44
- Operons 17
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 559 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -54
Score: 4.8
Sequence: TTGTAAGCGTTTTAAG
Locus tag: GK1948
Name: mtlA
Funciton: PTS family mannitol-permease II, BC component
GK1948
mtlA
PTS family mannitol-permease II, BC component
Position: -59
Score: 5
Sequence: ATGAAAGCGTTATAAT
Locus tag: GK1875
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: GK1874
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
GK1875
xylA
Xylose isomerase (EC 5.3.1.5)
GK1874
xylB
Xylulose kinase (EC 2.7.1.17)
Position: -37
Score: 4.8
Sequence: TTGAAAACGCTTGAAT
Locus tag: GK0929
Name: ywcB
Funciton: Hypothetical membrane spanning protein
Locus tag: GK0928
Name: ywcA
Funciton: Putative sodium:proline symporter
GK0929
ywcB
Hypothetical membrane spanning protein
GK0928
ywcA
Putative sodium:proline symporter
Position: -50
Score: 4.8
Sequence: TTGAAAACGATATCAT
Locus tag: GK1859
Name: gmuB
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: GK1858
Name: gmuA
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: GK1857
Name: gmuC
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: GK1856
Name: gmuD
Funciton: Beta-glucosidase (EC 3.2.1.21)
Locus tag: GK1855
Name: gmuR
Funciton: Transcriptional regulator of glucomannan utilization, GntR family
GK1859
gmuB
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
GK1858
gmuA
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
GK1857
gmuC
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
GK1856
gmuD
Beta-glucosidase (EC 3.2.1.21)
GK1855
gmuR
Transcriptional regulator of glucomannan utilization, GntR family
Position: -129
Score: 4.4
Sequence: TTGAAAACGCTTCAAC
Locus tag: GK1910
Name: araF
Funciton: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Locus tag: GK1909
Name: araG
Funciton: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
Locus tag: GK1908
Name: araH
Funciton: L-arabinose transport system permease protein (TC 3.A.1.2.2)
GK1910
araF
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
GK1909
araG
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
GK1908
araH
L-arabinose transport system permease protein (TC 3.A.1.2.2)
Position: 96
Score: 4.7
Sequence: TTGGAAGCGTTTTTAT
Locus tag: GK3061
Name: sigL
Funciton: DNA-directed RNA polymerase sigma subunit SigL
GK3061
sigL
DNA-directed RNA polymerase sigma subunit SigL
Position: -47
Score: 4.2
Sequence: ATGAAAGCGCTAAGAC
Locus tag: GK1208
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: GK1209
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
GK1208
sucC
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
GK1209
sucD
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Position: -103
Score: 4.9
Sequence: TTGAAAACGCTTCAAA
Locus tag: GK1597
Name: yngJ
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: GK1598
Name: yngI
Funciton: Long-chain fatty-acid-CoA ligase (EC 6.2.1.3)
Locus tag: GK1599
Name: yngH
Funciton: Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14)
Locus tag: GK1600
Name: yngHB
Funciton: Biotin carboxyl carrier protein of methylcrotonyl-CoA carboxylase ( EC:6.4.1.2 )
Locus tag: GK1601
Name: yngG
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Locus tag: GK1602
Name: yngF
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: GK1603
Name: yngE
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
GK1597
yngJ
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
GK1598
yngI
Long-chain fatty-acid-CoA ligase (EC 6.2.1.3)
GK1599
yngH
Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14)
GK1600
yngHB
Biotin carboxyl carrier protein of methylcrotonyl-CoA carboxylase ( EC:6.4.1.2 )
GK1601
yngG
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
GK1602
yngF
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
GK1603
yngE
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Position: -50
Score: 4.5
Sequence: ATGAAAACGCTTTTGA
Locus tag: GK1942
Name: endR
Funciton: Probable HTH-type transcriptional regulator endR, LacI family
GK1942
endR
Probable HTH-type transcriptional regulator endR, LacI family
Position: -165
Score: 5.1
Sequence: ATGTAAGCGCATTCAA
Locus tag: GK2662
Name: dat
Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
GK2662
dat
Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Position: -43
Score: 4.6
Sequence: AAGAAAGCGGTTTCTT
Locus tag: GK2371
Name: null
Funciton: Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)
Locus tag: GK2370
Name: null
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
Locus tag: GK2369
Name: BH2954
Funciton: Protein kinase, ArgK family
GK2371
Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)
GK2370
Methylmalonyl-CoA mutase (EC 5.4.99.2)
GK2369
BH2954
Protein kinase, ArgK family
Position: -343
Score: 4.8
Sequence: ATAAAAGCGTTTTCAG
Locus tag: GK0396
Name: lutR
Funciton: Lactate-responsive regulator, GntR family
Locus tag: GK0395
Name: lutA
Funciton: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Locus tag: GK0394
Name: lutB
Funciton: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
Locus tag: GK0393
Name: lutC
Funciton: Predicted L-lactate dehydrogenase, hypothetical protein subunit
GK0396
lutR
Lactate-responsive regulator, GntR family
GK0395
lutA
Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
GK0394
lutB
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
GK0393
lutC
Predicted L-lactate dehydrogenase, hypothetical protein subunit
Position: -206
Score: 5.1
Sequence: TTGACAGCGTTTTCAA
Locus tag: GK1359
Name: glpF
Funciton: Glycerol uptake facilitator protein
Locus tag: GK1360
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
GK1359
glpF
Glycerol uptake facilitator protein
GK1360
glpK
Glycerol kinase (EC 2.7.1.30)
Position: -105
Score: 4.4
Sequence: TTATTAGCGCTTTCAA
Locus tag: GK2209
Name: ndk
Funciton: Nucleoside diphosphate kinase (EC 2.7.4.6)
GK2209
ndk
Nucleoside diphosphate kinase (EC 2.7.4.6)
Position: -40
Score: 4.6
Sequence: TTGTAATCGCTTTCTT
Locus tag: GK3397
Name: mmgA
Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Locus tag: GK3396
Name: GK3396
Funciton: Hypothetical protein
Locus tag: GK3395
Name: mmgB
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: GK3394
Name: mmgC
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
GK3397
mmgA
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
GK3396
GK3396
Hypothetical protein
GK3395
mmgB
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
GK3394
mmgC
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -123
Score: 4.1
Sequence: GTGAAAACGTTTATAC
Locus tag: GK1023
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: GK1024
Name: odhB
Funciton: 2-oxoglutarate dehydrogenase E2 component
GK1023
odhA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
GK1024
odhB
2-oxoglutarate dehydrogenase E2 component
Position: -41
Score: 4.6
Sequence: TTGAAAGGGGTTTCAA
Locus tag: GK3207
Name: GK3207
Funciton: Predicted beta-glucoside-regulated ABC transport system, sugar-binding protein
Locus tag: GK3206
Name: GK3206
Funciton: Predicted beta-glucoside-regulated ABC transport system, permease component 1
Locus tag: GK3205
Name: GK3205
Funciton: Predicted beta-glucoside-regulated ABC transport system, permease component 2
GK3207
GK3207
Predicted beta-glucoside-regulated ABC transport system, sugar-binding protein
GK3206
GK3206
Predicted beta-glucoside-regulated ABC transport system, permease component 1
GK3205
GK3205
Predicted beta-glucoside-regulated ABC transport system, permease component 2
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise