Regulon of CcpA in Anoxybacillus flavithermus WK1
| Regulator type: | Transcription factor |
| TF locus tag: | Aflv_0458 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Regulog: | CcpA - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 50 |
| - Operons | 25 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - CcpA
- By TF family - LacI
- By effector - HPr, phosphocarrier protein
- By pathway - Carbon catabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -65
Score: 4.4 Sequence: TTGAAAGCGGATGAAT
Locus tag: Aflv_1564
Name: mtlR Funciton: Mannitol operon activator, BglG family
Locus tag: Aflv_1563
Name: mtlF Funciton: PTS mannitol-specific enzyme IIA component
Locus tag: Aflv_1562
Name: mtlD Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
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mtlR
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Mannitol operon activator, BglG family
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mtlF
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PTS mannitol-specific enzyme IIA component
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mtlD
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Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
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Position: -58
Score: 4.5 Sequence: CTGTAAGCGCTTTAAT
Locus tag: Aflv_1566
Name: mtlA Funciton: PTS family mannitol-permease II, BC component |
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mtlA
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PTS family mannitol-permease II, BC component
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Position: -70
Score: 4.7 Sequence: ATGAAAACGATTTAAT
Locus tag: Aflv_0461
Name: acuA Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Locus tag: Aflv_0460
Name: acuB Funciton: Component of the acetoin degradation regulation pathway
Locus tag: Aflv_0459
Name: acuC Funciton: Acetoin dehydrogenase |
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acuA
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Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
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acuB
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Component of the acetoin degradation regulation pathway
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acuC
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Acetoin dehydrogenase
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Position: -23
Score: 4.5 Sequence: TTGAAAACGCTTATAC
Locus tag: Aflv_0894
Name: yqgQ Funciton: Hypothetical Cytosolic Protein
Locus tag: Aflv_0895
Name: glcK Funciton: Glucokinase (EC 2.7.1.2) |
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yqgQ
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Hypothetical Cytosolic Protein
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glcK
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Glucokinase (EC 2.7.1.2)
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Position: -30
Score: 4.4 Sequence: ATGAAATCGATTACAT
Locus tag: Aflv_2303
Name: msmX Funciton: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) |
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msmX
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Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19)
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Position: -131
Score: 4.5 Sequence: TCGTAAACGTTTACAA
Locus tag: Aflv_1436
Name: ywcJ Funciton: Formate/nitrite family of transporters |
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ywcJ
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Formate/nitrite family of transporters
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Position: 211
Score: 4.9 Sequence: ATGTAAGCGTTTTTAA
Locus tag: Aflv_2521
Name: sigL Funciton: DNA-directed RNA polymerase sigma subunit SigL |
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sigL
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DNA-directed RNA polymerase sigma subunit SigL
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Position: -34
Score: 4 Sequence: GTGAAACCGAATACAT
Locus tag: Aflv_0142
Name: mrp Funciton: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like |
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mrp
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Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
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Position: -170
Score: 4.8 Sequence: ATGTAAGCGGATACAT
Locus tag: Aflv_0590
Name: dat Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
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dat
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Branched-chain amino acid aminotransferase (EC 2.6.1.42)
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Position: -39
Score: 4.3 Sequence: AAGAAAGCGTTTTAAC
Locus tag: Aflv_0965
Name: null Funciton: Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)
Locus tag: Aflv_0966
Name: null Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
Locus tag: Aflv_0967
Name: BH2954 Funciton: Protein kinase, ArgK family |
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Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)
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Methylmalonyl-CoA mutase (EC 5.4.99.2)
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BH2954
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Protein kinase, ArgK family
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Position: -87
Score: 4.6 Sequence: ATGTAAGCGCAACCAT
Locus tag: Aflv_2010
Name: lutR Funciton: Lactate-responsive regulator, GntR family |
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lutR
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Lactate-responsive regulator, GntR family
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Position: -30
Score: 4.7 Sequence: AAGAAAACGTTTTCTT
Locus tag: Aflv_2009
Name: lutA Funciton: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Locus tag: Aflv_2008
Name: lutB Funciton: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
Locus tag: Aflv_2007
Name: lutC Funciton: Predicted L-lactate dehydrogenase, hypothetical protein subunit |
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lutA
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Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
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lutB
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Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
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lutC
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Predicted L-lactate dehydrogenase, hypothetical protein subunit
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Position: -76
Score: 4.6 Sequence: TGGAAAGCGTATACAT
Locus tag: Aflv_0347
Name: lctP Funciton: L-lactate permease |
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lctP
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L-lactate permease
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Position: 237
Score: 4.9 Sequence: ATGAAAGAGTTTTCAA
Locus tag: Aflv_0462
Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1) |
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acsA
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Acetyl-coenzyme A synthetase (EC 6.2.1.1)
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Position: -133
Score: 4.4 Sequence: AAGAAAACGTTTTCGT
Locus tag: Aflv_0480
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -94
Score: 4.7 Sequence: ATGTAAACGTTTTATT
Locus tag: Aflv_2029
Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Aflv_2030
Name: glcF Funciton: Predicted glycolate dehydrogenase, 2-subunit type (EC 1.1.99.14), iron-sulfur subunit GlcF |
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glcD
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Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
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glcF
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Predicted glycolate dehydrogenase, 2-subunit type (EC 1.1.99.14), iron-sulfur subunit GlcF
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Position: 405
Score: 4.8 Sequence: GTGAAAACGCATACAA
Locus tag: Aflv_0564
Name: lcfA Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfA
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -24
Score: 4.6 Sequence: ATGTAAGCGATTTAAA
Locus tag: Aflv_1478
Name: fruR Funciton: Transcriptional regulator of fructose utilization, DeoR family
Locus tag: Aflv_1477
Name: fruK Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: Aflv_1476
Name: fruA Funciton: PTS system fructose-specific enzyme II, ABC subunits (EC 2.7.1.69) |
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fruR
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Transcriptional regulator of fructose utilization, DeoR family
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fruK
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Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)
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fruA
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PTS system fructose-specific enzyme II, ABC subunits (EC 2.7.1.69)
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Position: -34
Score: 4.5 Sequence: ATGTAACCGGTTACAG
Locus tag: Aflv_2673
Name: rbsR Funciton: Ribose operon repressor, LacI family
Locus tag: Aflv_2672
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Aflv_2671
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: Aflv_2670
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Aflv_2669
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Aflv_2668
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
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rbsR
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Ribose operon repressor, LacI family
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rbsK
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Ribokinase (EC 2.7.1.15)
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rbsD
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Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
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rbsA
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Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
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rbsC
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Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
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rbsB
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Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
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Position: -16
Score: 4.7 Sequence: TTGAAAGGGCTTTCTT
Locus tag: Aflv_2739
Name: mmgA Funciton: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Locus tag: Aflv_2738
Name: mmgB Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: Aflv_2737
Name: mmgC Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
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mmgA
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3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
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mmgB
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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mmgC
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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Position: -107
Score: 4.6 Sequence: ATGTAAGCATTTTCTT
Locus tag: Aflv_0504
Name: mmgD Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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mmgD
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Citrate synthase (si) (EC 2.3.3.1)
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Position: -104
Score: 4.3 Sequence: ATTAAATCGTTTTCAT
Locus tag: Aflv_1096
Name: ndk Funciton: Nucleoside diphosphate kinase (EC 2.7.4.6) |
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ndk
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Nucleoside diphosphate kinase (EC 2.7.4.6)
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Position: -147
Score: 4.7 Sequence: ATGAAAGCGGATAAAA
Locus tag: Aflv_2785
Name: sacP Funciton: PTS sucrose-specific enzyme IIBC component
Locus tag: Aflv_2784
Name: sacK Funciton: Fructokinase (EC 2.7.1.4)
Locus tag: Aflv_2783
Name: sacA Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
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sacP
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PTS sucrose-specific enzyme IIBC component
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sacK
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Fructokinase (EC 2.7.1.4)
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sacA
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Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
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Position: -107
Score: 4.6 Sequence: ATGTAAGCATTTTCTT
Locus tag: Aflv_0504
Name: citZ Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: Aflv_0505
Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Locus tag: Aflv_0506
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) |
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citZ
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Citrate synthase (si) (EC 2.3.3.1)
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icd
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Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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Position: -114
Score: 4.9 Sequence: ATGAAAACGTTTTATA
Locus tag: Aflv_0998
Name: drm Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Aflv_0999
Name: punA Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: Aflv_1000
Name: pdp Funciton: Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
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drm
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Phosphopentomutase (EC 5.4.2.7)
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punA
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Purine nucleoside phosphorylase (EC 2.4.2.1)
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pdp
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Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |