Regulon of Trp_leader in Shewanella sediminis HAW-EB3
| Regulator type: | RNA regulatory element |
| Name: | Trp_leader |
| RFAM: | RF00513 |
| Regulation mode: | |
| Biological process: | Tryptophan biosynthesis |
| Effector: | |
| Regulog: | Trp_leader - Shewanellaceae |
| Under regulation: | |
| - Genes | 6 |
| - Operons | 1 |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By RNA motif - Trp_leader
- By pathway - Tryptophan biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -184
Score: 46.5 Sequence: CATTAATTGGTGGTG...
Locus tag: Ssed_1686
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Ssed_1685
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Ssed_1684
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Ssed_1683
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Ssed_1682
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Ssed_1681
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE
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Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
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trpG
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Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
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trpD
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Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
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trpC
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Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
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trpB
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Tryptophan synthase beta chain (EC 4.2.1.20)
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trpA
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Tryptophan synthase alpha chain (EC 4.2.1.20)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |