Regulon of ydaO-yuaA in Paenibacillus sp. JDR-2

Properties
Regulator type:	RNA regulatory element
Name:	ydaO-yuaA
RFAM:	RF00379
Regulation mode:
Biological process:	Cell wall metabolism; Osmotic stress response
Effector:
Regulog:	ydaO-yuaA - Bacillales
Under regulation:
- Genes	11
- Operons	5

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - ydaO-yuaA
By pathway - Cell wall metabolism
By pathway - Osmotic stress response

Regulated operons
	Locus Tag	Name	Function
Position: -163 Score: 67.8 Sequence: ATAAAACAAACTGCC... Locus tag: Pjdr2_0116 Name: COG0791 Funciton: Cell wall-associated hydrolase, COG0791
	Pjdr2_0116	COG0791	Cell wall-associated hydrolase, COG0791
Position: -233 Score: 83.2 Sequence: CGAATCGTATCAGCC... Locus tag: Pjdr2_4814 Name: ktrB Funciton: Potassium uptake protein, integral membrane component, KtrB Locus tag: Pjdr2_4813 Name: ktrA Funciton: Potassium uptake protein, integral membrane component, KtrA
	Pjdr2_4814	ktrB	Potassium uptake protein, integral membrane component, KtrB
	Pjdr2_4813	ktrA	Potassium uptake protein, integral membrane component, KtrA
Position: -323 Score: 85.3 Sequence: TAATTACAATAAGCT... Locus tag: Pjdr2_5396 Name: kamA Funciton: Lysine 2,3-aminomutase (EC 5.4.3.2)
	Pjdr2_5396	kamA	Lysine 2,3-aminomutase (EC 5.4.3.2)
Position: -340 Score: 81.4 Sequence: GTTCATATTCGCTGA... Locus tag: Pjdr2_0318 Name: ydaO Funciton: Putative metabolite transporter, COG0531
	Pjdr2_0318	ydaO	Putative metabolite transporter, COG0531
Position: -306 Score: 81.9 Sequence: TGTCTTTATCGCTTA... Locus tag: Pjdr2_5988 Name: null Funciton: Hypothetical protein Locus tag: Pjdr2_5989 Name: null Funciton: Hypothetical protein Locus tag: Pjdr2_5990 Name: kdpA Funciton: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) Locus tag: Pjdr2_5991 Name: kdpB Funciton: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) Locus tag: Pjdr2_5992 Name: kdpC Funciton: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) Locus tag: Pjdr2_5993 Name: kdpD Funciton: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
	Pjdr2_5988		Hypothetical protein
	Pjdr2_5989		Hypothetical protein
	Pjdr2_5990	kdpA	Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
	Pjdr2_5991	kdpB	Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
	Pjdr2_5992	kdpC	Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
	Pjdr2_5993	kdpD	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD