Regulon of AgaR in Stenotrophomonas maltophilia K279a
| Regulator type: | Transcription factor |
| TF locus tag: | Smlt4437 |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate |
| Regulog: | AgaR - Xanthomonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - AgaR
- By taxonomy - Xanthomonadales
- By TF family - DeoR
- By effector - N-acetylgalactosamine-6-phosphate
- By effector - Galactosamine-6-phosphate
- By pathway - N-acetylgalactosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -313
Score: 8.2 Sequence: CTTTCG-(13)-CGAAAG
Locus tag: Smlt4433
Name: agaH-III Funciton: Predicted secreted glycosyl hydrolase, GH31 family
Locus tag: Smlt4432
Name: omp_aga Funciton: TonB-dependent receptor possibly related to N-acetylgalactosamine uptake through the outer membrane
Locus tag: Smlt4431
Name: agaO Funciton: Secreted alpha-N-acetylgalactosaminidase (EC 3.2.1.49), GH109 family |
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agaH-III
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Predicted secreted glycosyl hydrolase, GH31 family
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omp_aga
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TonB-dependent receptor possibly related to N-acetylgalactosamine uptake through the outer membrane
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agaO
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Secreted alpha-N-acetylgalactosaminidase (EC 3.2.1.49), GH109 family
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Position: -64
Score: 8.2 Sequence: CTTTCG-(13)-CGAAAG
Locus tag: Smlt4434
Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: Smlt4435
Name: agaK Funciton: N-acetylgalactosamine kinase, ROK-type (EC 2.7.1.157)
Locus tag: Smlt4436
Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: Smlt4437
Name: agaR Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Locus tag: Smlt4438
Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: Smlt4439
Name: agaP-III Funciton: Predicted N-acetylgalactosamine permease, sugar transporter family |
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agaS
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Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
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agaK
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N-acetylgalactosamine kinase, ROK-type (EC 2.7.1.157)
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agaZ
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Tagatose-6-phosphate kinase (EC 2.7.1.144)
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agaR
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Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
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agaA
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N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
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agaP-III
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Predicted N-acetylgalactosamine permease, sugar transporter family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |