Regulon of AgaR in Aeromonas hydrophila subsp. hydrophila ATCC 7966
| Regulator type: | Transcription factor |
| TF locus tag: | AHA_0813 |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate |
| Regulog: | AgaR - Psychromonadaceae/Aeromonadales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - AgaR
- By taxonomy - Psychromonadaceae/Aeromonadales
- By TF family - DeoR
- By effector - N-acetylgalactosamine-6-phosphate
- By effector - Galactosamine-6-phosphate
- By pathway - N-acetylgalactosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -199
Score: -0.2 Sequence: GAAACGAAATAAAAG
Position: -153
Score: -0.7 Sequence: GAAATGAATCGAAAG
Position: -50
Score: 0.1 Sequence: GTAACGAAGTGAAAG
Locus tag: AHA_0813
Name: agaR Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|||
|
agaR
|
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
|
||
|
Position: -237
Score: 4.7 Sequence: CTTTCACTTCGTTAC
Position: -134
Score: 5.6 Sequence: CTTTCGATTCATTTC
Position: -88
Score: 4.9 Sequence: CTTTTATTTCGTTTC
Locus tag: AHA_0812
Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: AHA_0811
Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: AHA_0810
Name: agaV Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
Locus tag: AHA_0809
Name: agaW Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
Locus tag: AHA_0808
Name: agaE Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
Locus tag: AHA_0807
Name: agaF Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
Locus tag: AHA_0806
Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: AHA_0805
Name: agaY Funciton: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
Locus tag: AHA_0804
Name: agaH Funciton: Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family |
|||
|
agaZ
|
Tagatose-6-phosphate kinase (EC 2.7.1.144)
|
||
|
agaS
|
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
|
||
|
agaV
|
PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
|
||
|
agaW
|
PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
|
||
|
agaE
|
PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
|
||
|
agaF
|
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
|
||
|
agaA
|
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
|
||
|
agaY
|
Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
|
||
|
agaH
|
Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |