Regulon of AgaR in Psychromonas sp. CNPT3

Properties
Regulator type:	Transcription factor
TF locus tag:	PCNPT3_13671
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog:	AgaR - Psychromonadaceae/Aeromonadales
Statistics of regulated genes:
- Genes	4
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By trascription factor - AgaR
By taxonomy - Psychromonadaceae/Aeromonadales
By TF family - DeoR
By effector - N-acetylgalactosamine-6-phosphate
By effector - Galactosamine-6-phosphate
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -221 Score: -1 Sequence: ACAATAAAATGAAAG Position: -201 Score: -0.4 Sequence: AAAACAAAACGAAAG Position: -143 Score: -0.7 Sequence: AAAAGGAAATGAAAG Locus tag: PCNPT3_13671 Name: agaR Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
	PCNPT3_13671	agaR	N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -206 Score: 5.4 Sequence: CTTTCATTTCCTTTT Position: -148 Score: 5.8 Sequence: CTTTCGTTTTGTTTT Position: -128 Score: 5 Sequence: CTTTCATTTTATTGT Locus tag: PCNPT3_13666 Name: agaV Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) Locus tag: PCNPT3_13661 Name: agaW Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) Locus tag: PCNPT3_13656 Name: agaE Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
	PCNPT3_13666	agaV	PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
	PCNPT3_13661	agaW	PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
	PCNPT3_13656	agaE	PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD