Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SAM in Bacillus cereus ATCC 14579

Properties
Regulator type: RNA regulatory element
Name: SAM
RFAM: RF00162
Regulation mode:
Biological process: Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: SAM - Bacillales
Under regulation:
- Genes 45
- Operons 17
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -181
Score: 89.6
Sequence: ACTCTTATTGAGAGC...
Locus tag: BC4251
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
Locus tag: BC4250
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Position: -169
Score: 82.5
Sequence: TCTTATCAAGAGCAG...
Locus tag: BC4036
Name: mtnW
Funciton: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
Locus tag: BC4037
Name: mtnX
Funciton: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
Locus tag: BC4038
Name: mtnB
Funciton: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
Locus tag: BC4039
Name: mtnD
Funciton: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
mtnW
2,3-diketo-5-methylthiopentyl-1-phosphate enolase
mtnX
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
mtnB
Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
mtnD
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)

Position: -195
Score: 87.6
Sequence: TGTCTTATCAAGAGC...
Locus tag: BC0768
Name: mtrB
Funciton: Methythioribose ABC transport system, substrate-binding protein
Locus tag: BC0767
Name: mtrA
Funciton: Methythioribose ABC transport system, ATP-binding protein
Locus tag: BC0766
Name: mtrC
Funciton: Methythioribose ABC transport system, permease protein
mtrB
Methythioribose ABC transport system, substrate-binding protein
mtrA
Methythioribose ABC transport system, ATP-binding protein
mtrC
Methythioribose ABC transport system, permease protein

Position: -232
Score: 73.5
Sequence: ACTCTTATCAAGAGC...
Locus tag: BC4033
Name: mtnK
Funciton: 5-methylthioribose kinase (EC 2.7.1.100)
Locus tag: BC4032
Name: mtnA
Funciton: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
mtnK
5-methylthioribose kinase (EC 2.7.1.100)
mtnA
Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)

Position: -199
Score: 80.2
Sequence: TCTTATAAAGAGAGG...
Locus tag: BC1434
Name: metT
Funciton: Methionine transporter MetT
metT
Methionine transporter MetT

Position: -238
Score: 85.9
Sequence: CATTGTATCAAGAGA...
Locus tag: BC0216
Name: oppA1
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
oppA1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)

Position: -292
Score: 75.5
Sequence: TCTCTTATCCCGAGC...
Locus tag: BC4761
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)

Position: -419
Score: 93
Sequence: TCTCTTATCAAGAGA...
Locus tag: BC4987
Name: metN
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: BC4986
Name: metP
Funciton: Methionine ABC transporter permease protein
Locus tag: BC4985
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: BC4984
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
metN
Methionine ABC transporter ATP-binding protein
metP
Methionine ABC transporter permease protein
metQ
Methionine ABC transporter substrate-binding protein
metQ
Methionine ABC transporter substrate-binding protein

Position: -229
Score: 90.4
Sequence: TCTTATCCAGAGAGG...
Locus tag: BC0346
Name: metN3
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: BC0347
Name: metP3
Funciton: Methionine ABC transporter permease protein
Locus tag: BC0348
Name: metQ3
Funciton: Methionine ABC transporter substrate-binding protein
metN3
Methionine ABC transporter ATP-binding protein
metP3
Methionine ABC transporter permease protein
metQ3
Methionine ABC transporter substrate-binding protein

Position: -191
Score: 89.2
Sequence: ATTCTTATCACGAGA...
Locus tag: BC3176
Name: acy
Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
acy
N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)

Position: -202
Score: 96.5
Sequence: ACTCTTATCAAGAGT...
Locus tag: BC0198
Name: metQ2
Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: BC0197
Name: metN2
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: BC0196
Name: metP2
Funciton: Methionine ABC transporter permease protein
metQ2
Methionine ABC transporter substrate-binding protein
metN2
Methionine ABC transporter ATP-binding protein
metP2
Methionine ABC transporter permease protein

Position: -412
Score: 95.5
Sequence: GCTTATCAAGAGAAG...
Locus tag: BC1421
Name: cysH
Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
Locus tag: BC1422
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Locus tag: BC1423
Name: cysC
Funciton: Adenylylsulfate kinase (EC 2.7.1.25)
Locus tag: BC1424
Name: cysI
Funciton: Ferredoxin--sulfite reductase, bacillial type (EC 1.8.7.1)
Locus tag: BC1425
Name: null
Funciton: hypothetical protein
Locus tag: BC1426
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: BC1427
Name: sirB
Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
Locus tag: BC1428
Name: sirC
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
cysH
Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
cysC
Adenylylsulfate kinase (EC 2.7.1.25)
cysI
Ferredoxin--sulfite reductase, bacillial type (EC 1.8.7.1)
hypothetical protein
cysG
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
sirB
Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
sirC
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)

Position: -231
Score: 90.2
Sequence: AGTCTTATCAAGAAA...
Locus tag: BC5406
Name: metY3
Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Locus tag: BC5405
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Locus tag: BC5404
Name: hom
Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
metY3
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
hom
Homoserine dehydrogenase (EC 1.1.1.3)

Position: -204
Score: 94.5
Sequence: TCTTATCTAGAGAGG...
Locus tag: BC4253
Name: metI
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: BC4254
Name: metC
Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
metI
Cystathionine gamma-synthase (EC 2.5.1.48)
metC
Cystathionine beta-lyase (EC 4.4.1.8)

Position: -199
Score: 87.9
Sequence: TTCTTTATCAAGAGA...
Locus tag: BC0395
Name: BC0395
Funciton: Putative formamidase
BC0395
Putative formamidase

Position: -255
Score: 78.5
Sequence: ACTTATCCAGAGAGG...
Locus tag: BC2624
Name: mtsA
Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter
mtsA
Substrate-specific component MtsA of methionine-regulated ECF transporter

Position: -241
Score: 88.3
Sequence: ACTTATCCAGAGAGG...
Locus tag: BC0207
Name: oppB
Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Locus tag: BC0208
Name: oppC
Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
Locus tag: BC0209
Name: oppD
Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: BC0210
Name: oppF
Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
Locus tag: BC0211
Name: oppA
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
oppB
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
oppC
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
oppD
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
oppF
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
oppA
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD