Regulon of SAM in Bacillus cereus ATCC 14579

Properties
Regulator type:	RNA regulatory element
Name:	SAM
RFAM:	RF00162
Regulation mode:
Biological process:	Methionine biosynthesis
Effector:	S-adenosylmethionine
Regulog:	SAM - Bacillales
Under regulation:
- Genes	45
- Operons	17

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - SAM
By effector - S-adenosylmethionine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -181 Score: 89.6 Sequence: ACTCTTATTGAGAGC... Locus tag: BC4251 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain Locus tag: BC4250 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	BC4251	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
	BC4250	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -169 Score: 82.5 Sequence: TCTTATCAAGAGCAG... Locus tag: BC4036 Name: mtnW Funciton: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase Locus tag: BC4037 Name: mtnX Funciton: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase Locus tag: BC4038 Name: mtnB Funciton: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109) Locus tag: BC4039 Name: mtnD Funciton: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
	BC4036	mtnW	2,3-diketo-5-methylthiopentyl-1-phosphate enolase
	BC4037	mtnX	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
	BC4038	mtnB	Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
	BC4039	mtnD	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
Position: -195 Score: 87.6 Sequence: TGTCTTATCAAGAGC... Locus tag: BC0768 Name: mtrB Funciton: Methythioribose ABC transport system, substrate-binding protein Locus tag: BC0767 Name: mtrA Funciton: Methythioribose ABC transport system, ATP-binding protein Locus tag: BC0766 Name: mtrC Funciton: Methythioribose ABC transport system, permease protein
	BC0768	mtrB	Methythioribose ABC transport system, substrate-binding protein
	BC0767	mtrA	Methythioribose ABC transport system, ATP-binding protein
	BC0766	mtrC	Methythioribose ABC transport system, permease protein
Position: -232 Score: 73.5 Sequence: ACTCTTATCAAGAGC... Locus tag: BC4033 Name: mtnK Funciton: 5-methylthioribose kinase (EC 2.7.1.100) Locus tag: BC4032 Name: mtnA Funciton: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
	BC4033	mtnK	5-methylthioribose kinase (EC 2.7.1.100)
	BC4032	mtnA	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
Position: -199 Score: 80.2 Sequence: TCTTATAAAGAGAGG... Locus tag: BC1434 Name: metT Funciton: Methionine transporter MetT
	BC1434	metT	Methionine transporter MetT
Position: -238 Score: 85.9 Sequence: CATTGTATCAAGAGA... Locus tag: BC0216 Name: oppA1 Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
	BC0216	oppA1	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Position: -292 Score: 75.5 Sequence: TCTCTTATCCCGAGC... Locus tag: BC4761 Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
	BC4761	metK	S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -419 Score: 93 Sequence: TCTCTTATCAAGAGA... Locus tag: BC4987 Name: metN Funciton: Methionine ABC transporter ATP-binding protein Locus tag: BC4986 Name: metP Funciton: Methionine ABC transporter permease protein Locus tag: BC4985 Name: metQ Funciton: Methionine ABC transporter substrate-binding protein Locus tag: BC4984 Name: metQ Funciton: Methionine ABC transporter substrate-binding protein
	BC4987	metN	Methionine ABC transporter ATP-binding protein
	BC4986	metP	Methionine ABC transporter permease protein
	BC4985	metQ	Methionine ABC transporter substrate-binding protein
	BC4984	metQ	Methionine ABC transporter substrate-binding protein
Position: -229 Score: 90.4 Sequence: TCTTATCCAGAGAGG... Locus tag: BC0346 Name: metN3 Funciton: Methionine ABC transporter ATP-binding protein Locus tag: BC0347 Name: metP3 Funciton: Methionine ABC transporter permease protein Locus tag: BC0348 Name: metQ3 Funciton: Methionine ABC transporter substrate-binding protein
	BC0346	metN3	Methionine ABC transporter ATP-binding protein
	BC0347	metP3	Methionine ABC transporter permease protein
	BC0348	metQ3	Methionine ABC transporter substrate-binding protein
Position: -191 Score: 89.2 Sequence: ATTCTTATCACGAGA... Locus tag: BC3176 Name: acy Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
	BC3176	acy	N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
Position: -202 Score: 96.5 Sequence: ACTCTTATCAAGAGT... Locus tag: BC0198 Name: metQ2 Funciton: Methionine ABC transporter substrate-binding protein Locus tag: BC0197 Name: metN2 Funciton: Methionine ABC transporter ATP-binding protein Locus tag: BC0196 Name: metP2 Funciton: Methionine ABC transporter permease protein
	BC0198	metQ2	Methionine ABC transporter substrate-binding protein
	BC0197	metN2	Methionine ABC transporter ATP-binding protein
	BC0196	metP2	Methionine ABC transporter permease protein
Position: -412 Score: 95.5 Sequence: GCTTATCAAGAGAAG... Locus tag: BC1421 Name: cysH Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Locus tag: BC1422 Name: sat Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4) Locus tag: BC1423 Name: cysC Funciton: Adenylylsulfate kinase (EC 2.7.1.25) Locus tag: BC1424 Name: cysI Funciton: Ferredoxin--sulfite reductase, bacillial type (EC 1.8.7.1) Locus tag: BC1425 Name: null Funciton: hypothetical protein Locus tag: BC1426 Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Locus tag: BC1427 Name: sirB Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) Locus tag: BC1428 Name: sirC Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
	BC1421	cysH	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
	BC1422	sat	Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
	BC1423	cysC	Adenylylsulfate kinase (EC 2.7.1.25)
	BC1424	cysI	Ferredoxin--sulfite reductase, bacillial type (EC 1.8.7.1)
	BC1425		hypothetical protein
	BC1426	cysG	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
	BC1427	sirB	Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
	BC1428	sirC	Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
Position: -231 Score: 90.2 Sequence: AGTCTTATCAAGAAA... Locus tag: BC5406 Name: metY3 Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Locus tag: BC5405 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) Locus tag: BC5404 Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
	BC5406	metY3	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
	BC5405	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
	BC5404	hom	Homoserine dehydrogenase (EC 1.1.1.3)
Position: -204 Score: 94.5 Sequence: TCTTATCTAGAGAGG... Locus tag: BC4253 Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: BC4254 Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
	BC4253	metI	Cystathionine gamma-synthase (EC 2.5.1.48)
	BC4254	metC	Cystathionine beta-lyase (EC 4.4.1.8)
Position: -199 Score: 87.9 Sequence: TTCTTTATCAAGAGA... Locus tag: BC0395 Name: BC0395 Funciton: Putative formamidase
	BC0395	BC0395	Putative formamidase
Position: -255 Score: 78.5 Sequence: ACTTATCCAGAGAGG... Locus tag: BC2624 Name: mtsA Funciton: Substrate-specific component MtsA of methionine-regulated ECF transporter
	BC2624	mtsA	Substrate-specific component MtsA of methionine-regulated ECF transporter
Position: -241 Score: 88.3 Sequence: ACTTATCCAGAGAGG... Locus tag: BC0207 Name: oppB Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) Locus tag: BC0208 Name: oppC Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) Locus tag: BC0209 Name: oppD Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) Locus tag: BC0210 Name: oppF Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) Locus tag: BC0211 Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
	BC0207	oppB	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
	BC0208	oppC	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
	BC0209	oppD	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
	BC0210	oppF	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
	BC0211	oppA	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SAM in Bacillus cereus ATCC 14579

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --