Regulon of SAM in Geobacillus kaustophilus HTA426
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | SAM - Bacillales |
| Under regulation: | |
| - Genes | 24 |
| - Operons | 9 |
Member of regulog collections
- By taxonomy - Bacillales
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -179
Score: 84.4 Sequence: TCTTATCAAGAGCAG...
Locus tag: GK0953
Name: mtnW Funciton: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
Locus tag: GK0954
Name: mtnX Funciton: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
Locus tag: GK0955
Name: mtnB Funciton: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
Locus tag: GK0956
Name: mtnD Funciton: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) |
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mtnW
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2,3-diketo-5-methylthiopentyl-1-phosphate enolase
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mtnX
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2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
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mtnB
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Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
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mtnD
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1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
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Position: -311
Score: 87.5 Sequence: TCTTATCAAGAGAAG...
Locus tag: GK0866
Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: GK0867
Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8) |
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metI
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metC
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Cystathionine beta-lyase (EC 4.4.1.8)
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Position: -175
Score: 86 Sequence: ATTCTTATCAAGAGA...
Locus tag: GK0717
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
Locus tag: GK0716
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -231
Score: 43.7 Sequence: ACGTTGCTCGGGAGT...
Locus tag: GK0416
Name: cysH Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
Locus tag: GK0415
Name: sat Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Locus tag: GK0414
Name: cysC Funciton: Adenylylsulfate kinase (EC 2.7.1.25)
Locus tag: GK0413
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: GK0412
Name: sirB Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) |
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cysH
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Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
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sat
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Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
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cysC
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Adenylylsulfate kinase (EC 2.7.1.25)
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cysG
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Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
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sirB
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Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
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Position: -198
Score: 90.2 Sequence: GCTCTTATCAAGAGA...
Locus tag: GK2999
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: GK2998
Name: metP Funciton: Methionine ABC transporter permease protein
Locus tag: GK2997
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein |
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metN
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Methionine ABC transporter ATP-binding protein
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metP
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Methionine ABC transporter permease protein
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metQ
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Methionine ABC transporter substrate-binding protein
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Position: -526
Score: 69.1 Sequence: TCTTATCAAGAGTGG...
Locus tag: GK1362
Name: ywbC Funciton: Lactoylglutathione lyase and related lyases |
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ywbC
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Lactoylglutathione lyase and related lyases
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Position: -231
Score: 43.7 Sequence: ACGTTGCTCGGGAGT...
Locus tag: GK0416
Name: cysH Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) |
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cysH
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Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
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Position: -245
Score: 72 Sequence: ACTCTTATCCCGAGC...
Locus tag: GK2849
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -307
Score: 61.4 Sequence: CTTATCAAGAGTTGG...
Locus tag: GK0950
Name: mtnK Funciton: 5-methylthioribose kinase (EC 2.7.1.100)
Locus tag: GK0949
Name: mtnA Funciton: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
Locus tag: GK0948
Name: mtrB Funciton: Methythioribose ABC transport system, substrate-binding protein
Locus tag: GK0947
Name: mtrA Funciton: Methythioribose ABC transport system, ATP-binding protein
Locus tag: GK0946
Name: mtrC Funciton: Methythioribose ABC transport system, permease protein |
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mtnK
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5-methylthioribose kinase (EC 2.7.1.100)
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mtnA
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Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
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mtrB
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Methythioribose ABC transport system, substrate-binding protein
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mtrA
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Methythioribose ABC transport system, ATP-binding protein
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mtrC
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Methythioribose ABC transport system, permease protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |