Regulon of SAM in Bacillus licheniformis DSM 13

Properties
Regulator type:	RNA regulatory element
Name:	SAM
RFAM:	RF00162
Regulation mode:
Biological process:	Methionine biosynthesis
Effector:	S-adenosylmethionine
Regulog:	SAM - Bacillales
Under regulation:
- Genes	25
- Operons	10

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - SAM
By effector - S-adenosylmethionine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -572 Score: 85.9 Sequence: ACTTATCAAGAGCGG... Locus tag: BLi01778 Name: cysH Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) Locus tag: BLi01779 Name: cysP Funciton: Sulfate permease, Pit-type Locus tag: BLi01780 Name: sat Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4) Locus tag: BLi01781 Name: cysC Funciton: Adenylylsulfate kinase (EC 2.7.1.25) Locus tag: BLi01782 Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Locus tag: BLi01783 Name: sirB Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4) Locus tag: BLi01784 Name: sirC Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
	BLi01778	cysH	Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
	BLi01779	cysP	Sulfate permease, Pit-type
	BLi01780	sat	Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
	BLi01781	cysC	Adenylylsulfate kinase (EC 2.7.1.25)
	BLi01782	cysG	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
	BLi01783	sirB	Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
	BLi01784	sirC	Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
Position: -229 Score: 76.9 Sequence: TCTCTTATCGAGAGT... Locus tag: BLi01512 Name: mtnK Funciton: 5-methylthioribose kinase (EC 2.7.1.100) Locus tag: BLi01511 Name: mtnA Funciton: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
	BLi01512	mtnK	5-methylthioribose kinase (EC 2.7.1.100)
	BLi01511	mtnA	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
Position: -156 Score: 84.1 Sequence: TCTTATCAAGAGCAG... Locus tag: BLi01515 Name: mtnW Funciton: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase Locus tag: BLi01516 Name: mtnX Funciton: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase Locus tag: BLi01517 Name: mtnD Funciton: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
	BLi01515	mtnW	2,3-diketo-5-methylthiopentyl-1-phosphate enolase
	BLi01516	mtnX	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
	BLi01517	mtnD	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
Position: -471 Score: 71.6 Sequence: ACTCTTATCCCGAGC... Locus tag: BLi03196 Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
	BLi03196	metK	S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -213 Score: 72 Sequence: TCTTATTCAGAGAGG... Locus tag: BLi00972 Name: metN3 Funciton: Methionine ABC transporter ATP-binding protein Locus tag: BLi00973 Name: metP3 Funciton: Methionine ABC transporter permease protein Locus tag: BLi00974 Name: metQ3 Funciton: Methionine ABC transporter substrate-binding protein
	BLi00972	metN3	Methionine ABC transporter ATP-binding protein
	BLi00973	metP3	Methionine ABC transporter permease protein
	BLi00974	metQ3	Methionine ABC transporter substrate-binding protein
Position: -182 Score: 94.1 Sequence: CCTTATCAAGAGTGG... Locus tag: BLi04187 Name: metE2 Funciton: Putative methionine synthase II (cobalamin-independent)
	BLi04187	metE2	Putative methionine synthase II (cobalamin-independent)
Position: -165 Score: 85.2 Sequence: CAGCTTATAAAGAGA... Locus tag: BLi03178 Name: metQ1 Funciton: Methionine ABC transporter substrate-binding protein
	BLi03178	metQ1	Methionine ABC transporter substrate-binding protein
Position: -141 Score: 92.8 Sequence: TCTTATCACGAGAGG... Locus tag: BLi01289 Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: BLi01290 Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
	BLi01289	metI	Cystathionine gamma-synthase (EC 2.5.1.48)
	BLi01290	metC	Cystathionine beta-lyase (EC 4.4.1.8)
Position: -225 Score: 93.7 Sequence: TCTCTTATCCAGAGA... Locus tag: BLi03457 Name: metN Funciton: Methionine ABC transporter ATP-binding protein Locus tag: BLi03456 Name: metP Funciton: Methionine ABC transporter permease protein Locus tag: BLi03455 Name: metQ Funciton: Methionine ABC transporter substrate-binding protein
	BLi03457	metN	Methionine ABC transporter ATP-binding protein
	BLi03456	metP	Methionine ABC transporter permease protein
	BLi03455	metQ	Methionine ABC transporter substrate-binding protein
Position: -193 Score: 99.2 Sequence: GTTCTTATCAAGAGA... Locus tag: BLi01193 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain Locus tag: BLi01192 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	BLi01193	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
	BLi01192	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SAM in Bacillus licheniformis DSM 13

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --