Regulon of SAM in Bacillus licheniformis DSM 13
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | SAM - Bacillales |
| Under regulation: | |
| - Genes | 25 |
| - Operons | 10 |
Member of regulog collections
- By taxonomy - Bacillales
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -572
Score: 85.9 Sequence: ACTTATCAAGAGCGG...
Locus tag: BLi01778
Name: cysH Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
Locus tag: BLi01779
Name: cysP Funciton: Sulfate permease, Pit-type
Locus tag: BLi01780
Name: sat Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Locus tag: BLi01781
Name: cysC Funciton: Adenylylsulfate kinase (EC 2.7.1.25)
Locus tag: BLi01782
Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: BLi01783
Name: sirB Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
Locus tag: BLi01784
Name: sirC Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) |
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cysH
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Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
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cysP
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Sulfate permease, Pit-type
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sat
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Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
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cysC
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Adenylylsulfate kinase (EC 2.7.1.25)
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cysG
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Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
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sirB
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Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
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sirC
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Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
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Position: -229
Score: 76.9 Sequence: TCTCTTATCGAGAGT...
Locus tag: BLi01512
Name: mtnK Funciton: 5-methylthioribose kinase (EC 2.7.1.100)
Locus tag: BLi01511
Name: mtnA Funciton: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) |
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mtnK
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5-methylthioribose kinase (EC 2.7.1.100)
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mtnA
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Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
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Position: -156
Score: 84.1 Sequence: TCTTATCAAGAGCAG...
Locus tag: BLi01515
Name: mtnW Funciton: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
Locus tag: BLi01516
Name: mtnX Funciton: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
Locus tag: BLi01517
Name: mtnD Funciton: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) |
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mtnW
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2,3-diketo-5-methylthiopentyl-1-phosphate enolase
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mtnX
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2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
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mtnD
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1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
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Position: -471
Score: 71.6 Sequence: ACTCTTATCCCGAGC...
Locus tag: BLi03196
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -213
Score: 72 Sequence: TCTTATTCAGAGAGG...
Locus tag: BLi00972
Name: metN3 Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: BLi00973
Name: metP3 Funciton: Methionine ABC transporter permease protein
Locus tag: BLi00974
Name: metQ3 Funciton: Methionine ABC transporter substrate-binding protein |
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metN3
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Methionine ABC transporter ATP-binding protein
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metP3
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Methionine ABC transporter permease protein
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metQ3
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Methionine ABC transporter substrate-binding protein
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Position: -182
Score: 94.1 Sequence: CCTTATCAAGAGTGG...
Locus tag: BLi04187
Name: metE2 Funciton: Putative methionine synthase II (cobalamin-independent) |
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metE2
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Putative methionine synthase II (cobalamin-independent)
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Position: -165
Score: 85.2 Sequence: CAGCTTATAAAGAGA...
Locus tag: BLi03178
Name: metQ1 Funciton: Methionine ABC transporter substrate-binding protein |
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metQ1
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Methionine ABC transporter substrate-binding protein
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Position: -141
Score: 92.8 Sequence: TCTTATCACGAGAGG...
Locus tag: BLi01289
Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: BLi01290
Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8) |
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metI
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metC
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Cystathionine beta-lyase (EC 4.4.1.8)
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Position: -225
Score: 93.7 Sequence: TCTCTTATCCAGAGA...
Locus tag: BLi03457
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: BLi03456
Name: metP Funciton: Methionine ABC transporter permease protein
Locus tag: BLi03455
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein |
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metN
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Methionine ABC transporter ATP-binding protein
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metP
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Methionine ABC transporter permease protein
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metQ
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Methionine ABC transporter substrate-binding protein
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Position: -193
Score: 99.2 Sequence: GTTCTTATCAAGAGA...
Locus tag: BLi01193
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
Locus tag: BLi01192
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |