Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SAM in Bacillus amyloliquefaciens FZB42

Properties
Regulator type: RNA regulatory element
Name: SAM
RFAM: RF00162
Regulation mode:
Biological process: Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: SAM - Bacillales
Under regulation:
- Genes 25
- Operons 10
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -153
Score: 82.3
Sequence: TCTTATCAAGAGCAG...
Locus tag: RBAM_013370
Name: mtnW
Funciton: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
Locus tag: RBAM_013380
Name: mtnX
Funciton: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
Locus tag: RBAM_013390
Name: mtnB
Funciton: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
Locus tag: RBAM_013400
Name: mtnD
Funciton: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
RBAM_013370
mtnW
2,3-diketo-5-methylthiopentyl-1-phosphate enolase
RBAM_013380
mtnX
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
RBAM_013390
mtnB
Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
RBAM_013400
mtnD
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
Position: -265
Score: 69.2
Sequence: TCTCTTATCGAGAGT...
Locus tag: RBAM_013340
Name: mtnK
Funciton: 5-methylthioribose kinase (EC 2.7.1.100)
Locus tag: RBAM_013330
Name: mtnA
Funciton: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
RBAM_013340
mtnK
5-methylthioribose kinase (EC 2.7.1.100)
RBAM_013330
mtnA
Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
Position: -310
Score: 73
Sequence: ACTCTTATCCCGAGC...
Locus tag: RBAM_027570
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
RBAM_027570
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -194
Score: 89.9
Sequence: TCTTATCACGAGAGG...
Locus tag: RBAM_011930
Name: metI
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: RBAM_011940
Name: metC
Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
RBAM_011930
metI
Cystathionine gamma-synthase (EC 2.5.1.48)
RBAM_011940
metC
Cystathionine beta-lyase (EC 4.4.1.8)
Position: -212
Score: 92.7
Sequence: GTTCTTATCAAGAGA...
Locus tag: RBAM_011020
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
RBAM_011020
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain
Position: -213
Score: 94.3
Sequence: TCTCTTATCAAGAGA...
Locus tag: RBAM_029830
Name: metN
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: RBAM_029820
Name: metP
Funciton: Methionine ABC transporter permease protein
Locus tag: RBAM_029810
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
RBAM_029830
metN
Methionine ABC transporter ATP-binding protein
RBAM_029820
metP
Methionine ABC transporter permease protein
RBAM_029810
metQ
Methionine ABC transporter substrate-binding protein
Position: -239
Score: 68.3
Sequence: TCTCTTATCGAGAGT...
Locus tag: RBAM_013040
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
RBAM_013040
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -164
Score: 78.2
Sequence: CCTTATCAAGAGAGG...
Locus tag: RBAM_036120
Name: metE2
Funciton: Putative methionine synthase II (cobalamin-independent)
RBAM_036120
metE2
Putative methionine synthase II (cobalamin-independent)
Position: -230
Score: 74.1
Sequence: GCTTATCAAGAGCGG...
Locus tag: RBAM_015400
Name: cysH
Funciton: Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
Locus tag: RBAM_015410
Name: cysP
Funciton: Sulfate permease, Pit-type
Locus tag: RBAM_015420
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Locus tag: RBAM_015430
Name: cysC
Funciton: Adenylylsulfate kinase (EC 2.7.1.25)
Locus tag: RBAM_015440
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: RBAM_015450
Name: sirB
Funciton: Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
Locus tag: RBAM_015460
Name: sirC
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
RBAM_015400
cysH
Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)
RBAM_015410
cysP
Sulfate permease, Pit-type
RBAM_015420
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
RBAM_015430
cysC
Adenylylsulfate kinase (EC 2.7.1.25)
RBAM_015440
cysG
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
RBAM_015450
sirB
Sirohydrochlorin ferrochelatase (EC 4.99.1.4)
RBAM_015460
sirC
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)
Position: -215
Score: 84.3
Sequence: TTTTCTATCCAGAGA...
Locus tag: RBAM_018760
Name: yoaD
Funciton: Hydroxypyruvate reductase (EC 1.1.1.81)
Locus tag: RBAM_018750
Name: yoaC
Funciton: Sugar kinase similar to xylulokinase, FGGY family
Locus tag: RBAM_018740
Name: yoaB
Funciton: Predicted sulfate transporter
RBAM_018760
yoaD
Hydroxypyruvate reductase (EC 1.1.1.81)
RBAM_018750
yoaC
Sugar kinase similar to xylulokinase, FGGY family
RBAM_018740
yoaB
Predicted sulfate transporter
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