Regulon of GlcC in Burkholderia phymatum STM815

Properties
Regulator type:	Transcription factor
TF locus tag:	Bphy_7453, Bphy_5644
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Glycolate utilization
Effector:	Glycolate
Regulog:	GlcC - Burkholderia
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 21 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By trascription factor - GlcC
By TF family - GntR/Others
By effector - Glycolate
By pathway - Glycolate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -188 Score: 4.9 Sequence: ACTGGTATGACCAGT Locus tag: Bphy_6609 Name: glcG Funciton: Hypothetical protein GlcG in glycolate utilization operon Locus tag: Bphy_6610 Name: glcB Funciton: Malate synthase G (EC 2.3.3.9)
	Bphy_6609	glcG	Hypothetical protein GlcG in glycolate utilization operon
	Bphy_6610	glcB	Malate synthase G (EC 2.3.3.9)
Position: -220 Score: 4.6 Sequence: ACTGGTATGACCACT Position: -113 Score: 4.9 Sequence: ACTGGTACGACCACT Locus tag: Bphy_7454 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Bphy_7455 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: Bphy_7456 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
	Bphy_7454	glcD	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
	Bphy_7455	glcE	Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
	Bphy_7456	glcF	Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Position: -234 Score: 4.6 Sequence: ACTGGTATGACCACT Position: -126 Score: 4.8 Sequence: ACTGGTATTACCACT Locus tag: Bphy_5643 Name: glcD Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Locus tag: Bphy_5642 Name: glcE Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Locus tag: Bphy_5641 Name: glcF Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
	Bphy_5643	glcD	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
	Bphy_5642	glcE	Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
	Bphy_5641	glcF	Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Position: -120 Score: 5.8 Sequence: AGTGGTCGTACCAGT Position: -13 Score: 5.9 Sequence: AGTGGTCATACCAGT Locus tag: Bphy_7453 Name: glcC Funciton: Glycolate utilization operon transcriptional activator GlcC
	Bphy_7453	glcC	Glycolate utilization operon transcriptional activator GlcC
Position: -109 Score: 5.7 Sequence: AGTGGTAATACCAGT Position: -1 Score: 5.9 Sequence: AGTGGTCATACCAGT Locus tag: Bphy_5644 Name: glcC Funciton: Glycolate utilization operon transcriptional activator GlcC
	Bphy_5644	glcC	Glycolate utilization operon transcriptional activator GlcC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD