Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GlcC in Burkholderia phymatum STM815

Properties
Regulator type: Transcription factor
TF locus tag: Bphy_7453, Bphy_5644
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Glycolate utilization
Effector: Glycolate
Regulog: GlcC - Burkholderia
Statistics of regulated genes:
- Genes 10
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 21 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -188
Score: 4.9
Sequence: ACTGGTATGACCAGT
Locus tag: Bphy_6609
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
Locus tag: Bphy_6610
Name: glcB
Funciton: Malate synthase G (EC 2.3.3.9)
glcG
Hypothetical protein GlcG in glycolate utilization operon
glcB
Malate synthase G (EC 2.3.3.9)

Position: -220
Score: 4.6
Sequence: ACTGGTATGACCACT
Position: -113
Score: 4.9
Sequence: ACTGGTACGACCACT
Locus tag: Bphy_7454
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Bphy_7455
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: Bphy_7456
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
glcD
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
glcE
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
glcF
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF

Position: -234
Score: 4.6
Sequence: ACTGGTATGACCACT
Position: -126
Score: 4.8
Sequence: ACTGGTATTACCACT
Locus tag: Bphy_5643
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: Bphy_5642
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: Bphy_5641
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
glcD
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
glcE
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
glcF
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF

Position: -120
Score: 5.8
Sequence: AGTGGTCGTACCAGT
Position: -13
Score: 5.9
Sequence: AGTGGTCATACCAGT
Locus tag: Bphy_7453
Name: glcC
Funciton: Glycolate utilization operon transcriptional activator GlcC
glcC
Glycolate utilization operon transcriptional activator GlcC

Position: -109
Score: 5.7
Sequence: AGTGGTAATACCAGT
Position: -1
Score: 5.9
Sequence: AGTGGTCATACCAGT
Locus tag: Bphy_5644
Name: glcC
Funciton: Glycolate utilization operon transcriptional activator GlcC
glcC
Glycolate utilization operon transcriptional activator GlcC
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD