Regulon of HexR in Marinomonas sp. MWYL1
| Regulator type: | Transcription factor |
| TF locus tag: | Mmwyl1_1082 |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Regulog: | HexR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - HexR
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -69
Score: 5.4 Sequence: CTGTAATTAAATTACAA
Locus tag: Mmwyl1_0723
Name: gpmM Funciton: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) |
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gpmM
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2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
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Position: -101
Score: 5.4 Sequence: TTGTAATTTTATTACAT
Position: -39
Score: 4.4 Sequence: TTGTTGTAAAATTTCAA
Locus tag: Mmwyl1_1037
Name: glk Funciton: Glucokinase (EC 2.7.1.2)
Locus tag: Mmwyl1_1038
Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Mmwyl1_1039
Name: eda Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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glk
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Glucokinase (EC 2.7.1.2)
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zwf
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Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
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eda
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4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Position: -310
Score: 5.1 Sequence: ATGTAATATTACTACAT
Position: -239
Score: 5.4 Sequence: TTGTAATTTTTTTACAA
Position: -74
Score: 4.1 Sequence: ATGTAGTATTTTTACGT
Locus tag: Mmwyl1_1079
Name: gapA Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: Mmwyl1_1078
Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40)
Locus tag: Mmwyl1_1077
Name: mgsA Funciton: Methylglyoxal synthase (EC 4.2.3.3) |
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gapA
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NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
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pykA
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Pyruvate kinase (EC 2.7.1.40)
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mgsA
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Methylglyoxal synthase (EC 4.2.3.3)
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Position: -219
Score: 4 Sequence: TgGaAATAAaATTAaAA
Locus tag: Mmwyl1_2307
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Mmwyl1_2306
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
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aceE
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Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
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aceF
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Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
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Position: -145
Score: 5.4 Sequence: TTGTAAAAAAATTACAA
Position: -74
Score: 5.1 Sequence: ATGTAGTAATATTACAT
Locus tag: Mmwyl1_1080
Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12) |
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edd
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Phosphogluconate dehydratase (EC 4.2.1.12)
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Position: -163
Score: 4.6 Sequence: CTGTCAGATAATTACAA
Locus tag: Mmwyl1_2805
Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1) |
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gltA
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Citrate synthase (si) (EC 2.3.3.1)
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Position: -281
Score: 4.3 Sequence: TGGTAGAAAGCCTACAG
Position: -133
Score: 4.3 Sequence: TGGTAATAAAATAACAT
Locus tag: Mmwyl1_3504
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
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Position: -122
Score: 4.8 Sequence: TCGTAATTTACTTACAA
Locus tag: Mmwyl1_2926
Name: prpB Funciton: Carboxyphosphonoenolpyruvate phosphonomutase (EC 2.7.8.23) |
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prpB
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Carboxyphosphonoenolpyruvate phosphonomutase (EC 2.7.8.23)
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Position: -192
Score: 4.7 Sequence: TTGAAATAAAACTACAT
Locus tag: Mmwyl1_1405
Name: ppsA Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2) |
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ppsA
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Phosphoenolpyruvate synthase (EC 2.7.9.2)
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Position: -90
Score: 5.3 Sequence: TTGTAGTGTTCTTACAA
Locus tag: Mmwyl1_3958
Name: gapB Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
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gapB
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NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |