Regulon of TPP in Shewanella sp W3-18-1

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Shewanellaceae
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -183 Score: 67.6 Sequence: AAGCGCCGCCAAGGG... Locus tag: Sputw3181_2365 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: Sputw3181_2364 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: Sputw3181_2363 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: Sputw3181_2362 Name: thiK Funciton: predicted thiamine kinase, aminoglycoside phosphotransferase family
	Sputw3181_2365	omp_thi	predicted thiamin-specific outer membrane transporter, TonB-dependent
	Sputw3181_2364	ykoF	Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
	Sputw3181_2363	pnuT	Predicted thiamin transporter PnuT
	Sputw3181_2362	thiK	predicted thiamine kinase, aminoglycoside phosphotransferase family
Position: -300 Score: 75.1 Sequence: ACTCATCTTGTCGGA... Locus tag: Sputw3181_2086 Name: thiC Funciton: Phosphomethylpyrimidine synthase Locus tag: Sputw3181_2085 Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: Sputw3181_2084 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: Sputw3181_2083 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Sputw3181_2082 Name: thiG Funciton: Thiazole synthase Locus tag: Sputw3181_2081 Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
	Sputw3181_2086	thiC	Phosphomethylpyrimidine synthase
	Sputw3181_2085	thiDE	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Sputw3181_2084	thiF	Sulfur carrier protein adenylyltransferase ThiF
	Sputw3181_2083	thiS	Sulfur carrier protein ThiS
	Sputw3181_2082	thiG	Thiazole synthase
	Sputw3181_2081	thiH	2-iminoacetate synthase (EC 1.3.99.n2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD