Regulon of TPP in Shewanella piezotolerans WP3

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Shewanellaceae
Under regulation:
- Genes	11
- Operons	2

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -170 Score: 72.9 Sequence: TCATCTTGTCGGAGT... Locus tag: swp_2330 Name: thiC Funciton: Phosphomethylpyrimidine synthase Locus tag: swp_2331 Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: swp_2332 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: swp_2333 Name: null Funciton: hypothetical protein swp_2333 Locus tag: swp_2334 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: swp_2335 Name: thiG Funciton: Thiazole synthase Locus tag: swp_2336 Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
	swp_2330	thiC	Phosphomethylpyrimidine synthase
	swp_2331	thiDE	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	swp_2332	thiF	Sulfur carrier protein adenylyltransferase ThiF
	swp_2333		hypothetical protein swp_2333
	swp_2334	thiS	Sulfur carrier protein ThiS
	swp_2335	thiG	Thiazole synthase
	swp_2336	thiH	2-iminoacetate synthase (EC 1.3.99.n2)
Position: -183 Score: 69.1 Sequence: CGGCGGTGCCAAGGG... Locus tag: swp_2907 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: swp_2906 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: swp_2905 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: swp_2904 Name: thiK Funciton: predicted thiamine kinase, aminoglycoside phosphotransferase family
	swp_2907	omp_thi	predicted thiamin-specific outer membrane transporter, TonB-dependent
	swp_2906	ykoF	Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
	swp_2905	pnuT	Predicted thiamin transporter PnuT
	swp_2904	thiK	predicted thiamine kinase, aminoglycoside phosphotransferase family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD