Regulon of TPP in Shewanella pealeana ATCC 700345

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Shewanellaceae
Under regulation:
- Genes	10
- Operons	2

Member of regulog collections

By taxonomy - Shewanellaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -246 Score: 71 Sequence: GCTCATCTTGTCGGA... Locus tag: Spea_2383 Name: thiC Funciton: Phosphomethylpyrimidine synthase Locus tag: Spea_2382 Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: Spea_2381 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: Spea_2380 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Spea_2379 Name: thiG Funciton: Thiazole synthase Locus tag: Spea_2378 Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
	Spea_2383	thiC	Phosphomethylpyrimidine synthase
	Spea_2382	thiDE	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Spea_2381	thiF	Sulfur carrier protein adenylyltransferase ThiF
	Spea_2380	thiS	Sulfur carrier protein ThiS
	Spea_2379	thiG	Thiazole synthase
	Spea_2378	thiH	2-iminoacetate synthase (EC 1.3.99.n2)
Position: -182 Score: 66.8 Sequence: CGCTCGCCAAGGGGT... Locus tag: Spea_1828 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: Spea_1829 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: Spea_1830 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: Spea_1831 Name: thiK Funciton: predicted thiamine kinase, aminoglycoside phosphotransferase family
	Spea_1828	omp_thi	predicted thiamin-specific outer membrane transporter, TonB-dependent
	Spea_1829	ykoF	Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
	Spea_1830	pnuT	Predicted thiamin transporter PnuT
	Spea_1831	thiK	predicted thiamine kinase, aminoglycoside phosphotransferase family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD