Regulon of TPP in Shewanella baltica OS155
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Shewanellaceae |
| Under regulation: | |
| - Genes | 4 |
| - Operons | 1 |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -179
Score: 72.2 Sequence: GCGTCGCCAAGGGGT...
Locus tag: Sbal_1802
Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent
Locus tag: Sbal_1803
Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
Locus tag: Sbal_1804
Name: pnuT Funciton: Predicted thiamin transporter PnuT
Locus tag: Sbal_1805
Name: thiK Funciton: predicted thiamine kinase, aminoglycoside phosphotransferase family |
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omp_thi
|
predicted thiamin-specific outer membrane transporter, TonB-dependent
|
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ykoF
|
Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative
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pnuT
|
Predicted thiamin transporter PnuT
|
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thiK
|
predicted thiamine kinase, aminoglycoside phosphotransferase family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |