Regulon of YodB/CatR in Paenibacillus sp. JDR-2
| Regulator type: | Transcription factor |
| TF locus tag: | Pjdr2_1364, Pjdr2_4807 |
| Regulator family: | HxlR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response |
| Effector: | Diamide; Quinone |
| Regulog: | YodB/CatR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - HxlR
- By effector - Diamide
- By effector - Quinone
- By pathway - Oxidative stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -183
Score: 4.7 Sequence: AGTTACTATTAGTAACG
Locus tag: Pjdr2_1365
Name: ribB Funciton: GTP cyclohydrolase II( EC 3.5.4.25 ) |
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ribB
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GTP cyclohydrolase II( EC 3.5.4.25 )
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Position: -47
Score: 5.1 Sequence: AGTTACAAAAAGTTACT
Locus tag: Pjdr2_4953
Name: azoR1 Funciton: FMN-dependent NADH-azoreductase |
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azoR1
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FMN-dependent NADH-azoreductase
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Position: -37
Score: 5 Sequence: ATTTACAAAAAGTAACT
Locus tag: Pjdr2_2046
Name: catE Funciton: Catechol-2,3-dioxygenase subunit
Locus tag: Pjdr2_2045
Name: ytkL Funciton: Metal-dependent hydrolase |
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catE
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Catechol-2,3-dioxygenase subunit
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ytkL
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Metal-dependent hydrolase
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Position: -134
Score: 4.2 Sequence: ACTTACTTTAGTCAAGT
Locus tag: Pjdr2_4807
Name: yodB Funciton: Transcriptional regulator of oxidative stress, HxlR family |
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yodB
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Transcriptional regulator of oxidative stress, HxlR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |