Regulon of YodB/CatR in Bacillus pumilus SAFR-032
| Regulator type: | Transcription factor |
| TF locus tag: | BPUM_3039, BPUM_1875 |
| Regulator family: | HxlR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response |
| Effector: | Diamide; Quinone |
| Regulog: | YodB/CatR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - HxlR
- By effector - Diamide
- By effector - Quinone
- By pathway - Oxidative stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -127
Score: 4.3 Sequence: AATTACTTGAAATAAGT
Position: -90
Score: 4.8 Sequence: AGTTACTAAAAGTAACA
Locus tag: BPUM_3530
Name: catE Funciton: Catechol-2,3-dioxygenase subunit
Locus tag: BPUM_3531
Name: ribB Funciton: GTP cyclohydrolase II( EC 3.5.4.25 )
Locus tag: BPUM_3532
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
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catE
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Catechol-2,3-dioxygenase subunit
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ribB
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GTP cyclohydrolase II( EC 3.5.4.25 )
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ribD
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Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
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Position: -75
Score: 5.5 Sequence: AGTTACAATAAGTAAGT
Locus tag: BPUM_1876
Name: yodC Funciton: Putative NAD(P)H nitroreductase |
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yodC
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Putative NAD(P)H nitroreductase
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Position: -81
Score: 5.5 Sequence: ACTTACTTATTGTAACT
Locus tag: BPUM_1875
Name: yodB Funciton: Transcriptional regulator of oxidative stress, HxlR family |
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yodB
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Transcriptional regulator of oxidative stress, HxlR family
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Position: -106
Score: 4.6 Sequence: ACTTACTTTTTTATAGT
Locus tag: BPUM_1077
Name: spxA Funciton: RNA polymerase-binding transcriptional regulator of oxidative stress response |
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spxA
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RNA polymerase-binding transcriptional regulator of oxidative stress response
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |