Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of YodB/CatR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type: Transcription factor
TF locus tag: RBAM_030960, RBAM_019300
Regulator family: HxlR
Regulation mode: repressor
Biological process: Oxidative stress response
Effector: Diamide; Quinone
Regulog: YodB/CatR - Bacillales
Statistics of regulated genes:
- Genes 5
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 42 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -63
Score: 5.3
Sequence: AGTTACATTTAGTAAGC
Locus tag: RBAM_019310
Name: yodC
Funciton: Putative NAD(P)H nitroreductase
yodC
Putative NAD(P)H nitroreductase

Position: -80
Score: 5.3
Sequence: GCTTACTAAATGTAACT
Locus tag: RBAM_019300
Name: yodB
Funciton: Transcriptional regulator of oxidative stress, HxlR family
yodB
Transcriptional regulator of oxidative stress, HxlR family

Position: -105
Score: 4.6
Sequence: ACTTACTTTTTTATAGT
Locus tag: RBAM_011500
Name: spxA
Funciton: RNA polymerase-binding transcriptional regulator of oxidative stress response
spxA
RNA polymerase-binding transcriptional regulator of oxidative stress response

Position: -42
Score: 5.5
Sequence: GCTTACATAAAGTAAGT
Locus tag: RBAM_008420
Name: catD
Funciton: Catechol-2,3-dioxygenase membrane subunit
Locus tag: RBAM_008430
Name: catE
Funciton: Catechol-2,3-dioxygenase subunit
catD
Catechol-2,3-dioxygenase membrane subunit
catE
Catechol-2,3-dioxygenase subunit
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD