Regulon of SinR in Bacillus pumilus SAFR-032

Properties
Regulator type:	Transcription factor
TF locus tag:	BPUM_2193
Regulator family:	XRE
Regulation mode:	repressor
Biological process:	Biofilm formation
Effector:	SinI, antirepressor protein
Regulog:	SinR - Bacillales
Statistics of regulated genes:
- Genes	17
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - XRE
By effector - SinI, antirepressor protein
By pathway - Biofilm formation

Regulated operons
	Locus Tag	Name	Function
Position: -41 Score: 6.3 Sequence: GTTCTTTTTAAAGAAC Locus tag: BPUM_2196 Name: yqxM Funciton: Lipoprotein for biofilm formation Locus tag: BPUM_2195 Name: sipW Funciton: Signal peptidase SipW (EC 3.4.21.89), required for TasA secretion Locus tag: BPUM_2194 Name: tasA Funciton: Stationary phase secreted protein TasA, major protein component of biofilm matrix
	BPUM_2196	yqxM	Lipoprotein for biofilm formation
	BPUM_2195	sipW	Signal peptidase SipW (EC 3.4.21.89), required for TasA secretion
	BPUM_2194	tasA	Stationary phase secreted protein TasA, major protein component of biofilm matrix
Position: -148 Score: 6.3 Sequence: GTTCTTTTTAAAGAAC Locus tag: BPUM_3084 Name: slr Funciton: Transcriptional repressor of cell separation and motility/antirepressor of SinR
	BPUM_3084	slr	Transcriptional repressor of cell separation and motility/antirepressor of SinR
Position: -125 Score: 6.3 Sequence: GTTCTTTAAAAAGAAC Locus tag: BPUM_3083 Name: epsA Funciton: Possible capsular polysaccharide biosynthesis protein Locus tag: BPUM_3082 Name: epsB Funciton: Capsular polysaccharide biosynthesis protein Locus tag: BPUM_3081 Name: epsC Funciton: Capsular polysaccharide biosynthesis protein Locus tag: BPUM_3080 Name: epsD Funciton: Putative glycosyltransferase Locus tag: BPUM_3079 Name: epsE Funciton: Family II glycosyltransferase/flagellar clutch Locus tag: BPUM_3078 Name: epsF Funciton: Putative glycosyltransferase Locus tag: BPUM_3077 Name: epsG Funciton: Putative transmembrane protein Locus tag: BPUM_3076 Name: epsH Funciton: Glycosyltransferase Locus tag: BPUM_3075 Name: epsI Funciton: Putative pyruvyl transferase Locus tag: BPUM_3074 Name: epsK Funciton: Uncharacterized membrane protein Locus tag: BPUM_3073 Name: epsL Funciton: Sugar transferase Locus tag: BPUM_3072 Name: epsM Funciton: Putative O-acetyltransferase involved in pellicle formation Locus tag: BPUM_3071 Name: epsN Funciton: Putative pyridoxal phosphate-dependent aminotransferase
	BPUM_3083	epsA	Possible capsular polysaccharide biosynthesis protein
	BPUM_3082	epsB	Capsular polysaccharide biosynthesis protein
	BPUM_3081	epsC	Capsular polysaccharide biosynthesis protein
	BPUM_3080	epsD	Putative glycosyltransferase
	BPUM_3079	epsE	Family II glycosyltransferase/flagellar clutch
	BPUM_3078	epsF	Putative glycosyltransferase
	BPUM_3077	epsG	Putative transmembrane protein
	BPUM_3076	epsH	Glycosyltransferase
	BPUM_3075	epsI	Putative pyruvyl transferase
	BPUM_3074	epsK	Uncharacterized membrane protein
	BPUM_3073	epsL	Sugar transferase
	BPUM_3072	epsM	Putative O-acetyltransferase involved in pellicle formation
	BPUM_3071	epsN	Putative pyridoxal phosphate-dependent aminotransferase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SinR in Bacillus pumilus SAFR-032

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --