Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SinR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type: Transcription factor
TF locus tag: RBAM_022930
Regulator family: XRE
Regulation mode: repressor
Biological process: Biofilm formation
Effector: SinI, antirepressor protein
Regulog: SinR - Bacillales
Statistics of regulated genes:
- Genes 19
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -125
Score: 6.3
Sequence: GTTCTTTAAAAAGAAC
Locus tag: RBAM_031670
Name: epsA
Funciton: Possible capsular polysaccharide biosynthesis protein
Locus tag: RBAM_031660
Name: epsB
Funciton: Capsular polysaccharide biosynthesis protein
Locus tag: RBAM_031650
Name: epsC
Funciton: Capsular polysaccharide biosynthesis protein
Locus tag: RBAM_031640
Name: epsD
Funciton: Putative glycosyltransferase
Locus tag: RBAM_031630
Name: epsE
Funciton: Family II glycosyltransferase/flagellar clutch
Locus tag: RBAM_031620
Name: epsF
Funciton: Putative glycosyltransferase
Locus tag: RBAM_031610
Name: epsG
Funciton: Putative transmembrane protein
Locus tag: RBAM_031600
Name: epsH
Funciton: Glycosyltransferase
Locus tag: RBAM_031590
Name: epsI
Funciton: Putative pyruvyl transferase
Locus tag: RBAM_031580
Name: epsJ
Funciton: Putative glycosyltransferase involved in pellicle formation
Locus tag: RBAM_031570
Name: epsK
Funciton: Uncharacterized membrane protein
Locus tag: RBAM_031560
Name: epsL
Funciton: Sugar transferase
Locus tag: RBAM_031550
Name: epsM
Funciton: Putative O-acetyltransferase involved in pellicle formation
Locus tag: RBAM_031540
Name: epsN
Funciton: Putative pyridoxal phosphate-dependent aminotransferase
Locus tag: RBAM_031530
Name: epsO
Funciton: Putative pyruvyl transferase
RBAM_031670
epsA
Possible capsular polysaccharide biosynthesis protein
RBAM_031660
epsB
Capsular polysaccharide biosynthesis protein
RBAM_031650
epsC
Capsular polysaccharide biosynthesis protein
RBAM_031640
epsD
Putative glycosyltransferase
RBAM_031630
epsE
Family II glycosyltransferase/flagellar clutch
RBAM_031620
epsF
Putative glycosyltransferase
RBAM_031610
epsG
Putative transmembrane protein
RBAM_031600
epsH
Glycosyltransferase
RBAM_031590
epsI
Putative pyruvyl transferase
RBAM_031580
epsJ
Putative glycosyltransferase involved in pellicle formation
RBAM_031570
epsK
Uncharacterized membrane protein
RBAM_031560
epsL
Sugar transferase
RBAM_031550
epsM
Putative O-acetyltransferase involved in pellicle formation
RBAM_031540
epsN
Putative pyridoxal phosphate-dependent aminotransferase
RBAM_031530
epsO
Putative pyruvyl transferase
Position: -135
Score: 6.3
Sequence: GTTCTTTTTAAAGAAC
Locus tag: RBAM_031680
Name: slr
Funciton: Transcriptional repressor of cell separation and motility/antirepressor of SinR
RBAM_031680
slr
Transcriptional repressor of cell separation and motility/antirepressor of SinR
Position: -55
Score: 6.1
Sequence: GTTCTTTAAAGAGAAC
Locus tag: RBAM_022960
Name: yqxM
Funciton: Lipoprotein for biofilm formation
Locus tag: RBAM_022950
Name: sipW
Funciton: Signal peptidase SipW (EC 3.4.21.89), required for TasA secretion
Locus tag: RBAM_022940
Name: tasA
Funciton: Stationary phase secreted protein TasA, major protein component of biofilm matrix
RBAM_022960
yqxM
Lipoprotein for biofilm formation
RBAM_022950
sipW
Signal peptidase SipW (EC 3.4.21.89), required for TasA secretion
RBAM_022940
tasA
Stationary phase secreted protein TasA, major protein component of biofilm matrix
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