Regulon of AgaR in Citrobacter koseri ATCC BAA-895
| Regulator type: | Transcription factor |
| TF locus tag: | CKO_04529 |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate |
| Regulog: | AgaR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - AgaR
- By TF family - DeoR
- By effector - N-acetylgalactosamine-6-phosphate
- By effector - Galactosamine-6-phosphate
- By pathway - N-acetylgalactosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -35
Score: -1.1 Sequence: GAAATGAAACGAAAG
Locus tag: CKO_04529
Name: agaR Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
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agaR
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Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
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Position: -252
Score: 5.3 Sequence: CTTTCTTTTTCTTTC
Position: -150
Score: 5.7 Sequence: TTTTCGTTTTATTTC
Position: -119
Score: 5.4 Sequence: CTTTCGATTTCTTTT
Locus tag: CKO_04536
Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: CKO_04537
Name: agaY Funciton: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-) |
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agaS
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Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
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agaY
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Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
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Position: -247
Score: 5.9 Sequence: CTTTCGTTTCATTTC
Position: -152
Score: 5.4 Sequence: CTTTCATTATGTTTC
Position: -108
Score: 5.9 Sequence: CTTTCGTTTTATTTT
Locus tag: CKO_04530
Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: CKO_04531
Name: agaV Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
Locus tag: CKO_04532
Name: agaW Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
Locus tag: CKO_04533
Name: agaE Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
Locus tag: CKO_04534
Name: agaF Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
Locus tag: CKO_04535
Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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agaZ
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Tagatose-6-phosphate kinase (EC 2.7.1.144)
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agaV
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PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
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agaW
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PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
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agaE
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PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
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agaF
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PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
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agaA
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N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |