Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of AgaR in Citrobacter koseri ATCC BAA-895

Properties
Regulator type: Transcription factor
TF locus tag: CKO_04529
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog: AgaR - Enterobacteriales
Statistics of regulated genes:
- Genes 9
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -35
Score: -1.1
Sequence: GAAATGAAACGAAAG
Locus tag: CKO_04529
Name: agaR
Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
agaR
Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family

Position: -252
Score: 5.3
Sequence: CTTTCTTTTTCTTTC
Position: -150
Score: 5.7
Sequence: TTTTCGTTTTATTTC
Position: -119
Score: 5.4
Sequence: CTTTCGATTTCTTTT
Locus tag: CKO_04536
Name: agaS
Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: CKO_04537
Name: agaY
Funciton: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
agaS
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
agaY
Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)

Position: -247
Score: 5.9
Sequence: CTTTCGTTTCATTTC
Position: -152
Score: 5.4
Sequence: CTTTCATTATGTTTC
Position: -108
Score: 5.9
Sequence: CTTTCGTTTTATTTT
Locus tag: CKO_04530
Name: agaZ
Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: CKO_04531
Name: agaV
Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
Locus tag: CKO_04532
Name: agaW
Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
Locus tag: CKO_04533
Name: agaE
Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
Locus tag: CKO_04534
Name: agaF
Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
Locus tag: CKO_04535
Name: agaA
Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
agaZ
Tagatose-6-phosphate kinase (EC 2.7.1.144)
agaV
PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
agaW
PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
agaE
PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
agaF
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
agaA
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD