Regulon of AgaR in Citrobacter koseri ATCC BAA-895

Properties
Regulator type:	Transcription factor
TF locus tag:	CKO_04529
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Regulog:	AgaR - Enterobacteriales
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - AgaR
By TF family - DeoR
By effector - N-acetylgalactosamine-6-phosphate
By effector - Galactosamine-6-phosphate
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -35 Score: -1.1 Sequence: GAAATGAAACGAAAG Locus tag: CKO_04529 Name: agaR Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
	CKO_04529	agaR	Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Position: -252 Score: 5.3 Sequence: CTTTCTTTTTCTTTC Position: -150 Score: 5.7 Sequence: TTTTCGTTTTATTTC Position: -119 Score: 5.4 Sequence: CTTTCGATTTCTTTT Locus tag: CKO_04536 Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) Locus tag: CKO_04537 Name: agaY Funciton: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
	CKO_04536	agaS	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
	CKO_04537	agaY	Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
Position: -247 Score: 5.9 Sequence: CTTTCGTTTCATTTC Position: -152 Score: 5.4 Sequence: CTTTCATTATGTTTC Position: -108 Score: 5.9 Sequence: CTTTCGTTTTATTTT Locus tag: CKO_04530 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144) Locus tag: CKO_04531 Name: agaV Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) Locus tag: CKO_04532 Name: agaW Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) Locus tag: CKO_04533 Name: agaE Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69) Locus tag: CKO_04534 Name: agaF Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) Locus tag: CKO_04535 Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
	CKO_04530	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144)
	CKO_04531	agaV	PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
	CKO_04532	agaW	PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
	CKO_04533	agaE	PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
	CKO_04534	agaF	PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
	CKO_04535	agaA	N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD