Regulon of DeoR in Erwinia carotovora subsp. atroseptica SCRI1043
| Regulator type: | Transcription factor |
| TF locus tag: | ECA2685 |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleoside utilization |
| Effector: | |
| Regulog: | DeoR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - DeoR
- By pathway - Deoxyribonucleoside utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -109
Score: 5.5 Sequence: TGTTATTAAAATAACA
Position: -79
Score: 4.3 Sequence: TGTTATTTTTGTGACA
Locus tag: ECA2684
Name: deoC2 Funciton: deoxyribose-phosphate aldolase
Locus tag: ECA2685
Name: deoR Funciton: transcriptional repressor for deoxyribose operon |
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deoC2
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deoxyribose-phosphate aldolase
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deoR
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transcriptional repressor for deoxyribose operon
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Position: -169
Score: 4.7 Sequence: TGTGATTAAAATCACA
Locus tag: ECA3796
Name: tsx Funciton: nucleoside-specific channel-forming protein |
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tsx
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nucleoside-specific channel-forming protein
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Position: -185
Score: 5.4 Sequence: TGTTGAAATAATCACA
Locus tag: ECA0727
Name: deoC Funciton: deoxyribose-phosphate aldolase
Locus tag: ECA0728
Name: deoA Funciton: thymidine phosphorylase
Locus tag: ECA0729
Name: deoB Funciton: phosphopentomutase
Locus tag: ECA0730
Name: deoD Funciton: purine-nucleoside phosphorylase |
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deoC
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deoxyribose-phosphate aldolase
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deoA
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thymidine phosphorylase
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deoB
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phosphopentomutase
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deoD
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purine-nucleoside phosphorylase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |