Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of ModE in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM0779
Regulator family: ModE
Regulation mode: repressor (activator)
Biological process: Molybdopterin biosynthesis; Molybdenum homeostasis
Effector: Molybdate
Regulog: ModE - Enterobacteriales
Statistics of regulated genes:
- Genes 29
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 55 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -200
Score: 6.6
Sequence: CGCTATGTATATGTTTATATAGCG
Locus tag: STM0802
Name: moaA
Funciton: Molybdenum cofactor biosynthesis protein MoaA
Locus tag: STM0803
Name: moaB
Funciton: Molybdenum cofactor biosynthesis protein MoaB
Locus tag: STM0804
Name: moaC
Funciton: Molybdenum cofactor biosynthesis protein MoaC
Locus tag: STM0805
Name: moaD
Funciton: Molybdenum cofactor biosynthesis protein MoaD
Locus tag: STM0806
Name: moaE
Funciton: Molybdenum cofactor biosynthesis protein MoaE
STM0802
moaA
Molybdenum cofactor biosynthesis protein MoaA
STM0803
moaB
Molybdenum cofactor biosynthesis protein MoaB
STM0804
moaC
Molybdenum cofactor biosynthesis protein MoaC
STM0805
moaD
Molybdenum cofactor biosynthesis protein MoaD
STM0806
moaE
Molybdenum cofactor biosynthesis protein MoaE
Position: -38
Score: 6.9
Sequence: CGCTATATAATTTATTATATAGCG
Locus tag: STM3151
Name: yghW
Funciton: hypothetical protein
STM3151
yghW
hypothetical protein
Position: -95
Score: 5.9
Sequence: CGATATATATCAGACTTTATAGCG
Position: -64
Score: 6.3
Sequence: CGCTATATAAAATTCTATACATCG
Locus tag: STM0964
Name: dmsA
Funciton: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Locus tag: STM0965
Name: dmsB
Funciton: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
Locus tag: STM0966
Name: dmsC
Funciton: Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
STM0964
dmsA
Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
STM0965
dmsB
Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)
STM0966
dmsC
Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)
Position: -41
Score: 6.6
Sequence: CGTTATATAATTATTTATATATCG
Locus tag: STM3142
Name: ECA3096
Funciton: putative ABC-transporter periplasmic-binding component
Locus tag: STM3141
Name: ECA3093
Funciton: putative ABC-transporter, molybdenum-binding periplasmic protein
STM3142
ECA3096
putative ABC-transporter periplasmic-binding component
STM3141
ECA3093
putative ABC-transporter, molybdenum-binding periplasmic protein
Position: -44
Score: 6.6
Sequence: CGTTATATTATCGTTTACATAACG
Locus tag: STM0781
Name: modA
Funciton: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
Locus tag: STM0782
Name: modB
Funciton: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
Locus tag: STM0783
Name: modC
Funciton: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
STM0781
modA
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
STM0782
modB
Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
STM0783
modC
Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
Position: -225
Score: 6.3
Sequence: CGTTATATAAATATCTATATAACT
Locus tag: STM2261
Name: napF
Funciton: ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA)
Locus tag: STM2260
Name: napD
Funciton: NapD family protein
Locus tag: STM2259
Name: napA
Funciton: nitrate reductase, periplasmic, large subunit
Locus tag: STM2258
Name: napG
Funciton: quinol dehydrogenase periplasmic component
Locus tag: STM2257
Name: napH
Funciton: quinol dehydrogenase membrane component
Locus tag: STM2256
Name: napB
Funciton: cytochrome c-type protein
Locus tag: STM2255
Name: napC
Funciton: nitrate reductase, cytochrome c-type, periplasmic
Locus tag: STM2254
Name: ccmA
Funciton: ABC superfamily (atp_bind), heme exporter protein, cytochrome c-type biogenesis protein
Locus tag: STM2253
Name: ccmB
Funciton: heme exporter protein B (cytochrome C-type biogenesis protein)
Locus tag: STM2252
Name: ccmC
Funciton: heme exporter protein C
Locus tag: STM2251
Name: ccmD
Funciton: heme exporter protein D (cytochrome C-type biogenesis protein)
Locus tag: STM2250
Name: ccmE
Funciton: cytochrome C-type biogenesis protein
Locus tag: STM2249
Name: ccmF
Funciton: heme lyase, CcmF subunit
Locus tag: STM2248
Name: ccmG
Funciton: periplasmic thioredoxin of cytochrome c-type biogenesis
Locus tag: STM2247
Name: ccmH
Funciton: cytochrome C biogenesis protein
STM2261
napF
ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA)
STM2260
napD
NapD family protein
STM2259
napA
nitrate reductase, periplasmic, large subunit
STM2258
napG
quinol dehydrogenase periplasmic component
STM2257
napH
quinol dehydrogenase membrane component
STM2256
napB
cytochrome c-type protein
STM2255
napC
nitrate reductase, cytochrome c-type, periplasmic
STM2254
ccmA
ABC superfamily (atp_bind), heme exporter protein, cytochrome c-type biogenesis protein
STM2253
ccmB
heme exporter protein B (cytochrome C-type biogenesis protein)
STM2252
ccmC
heme exporter protein C
STM2251
ccmD
heme exporter protein D (cytochrome C-type biogenesis protein)
STM2250
ccmE
cytochrome C-type biogenesis protein
STM2249
ccmF
heme lyase, CcmF subunit
STM2248
ccmG
periplasmic thioredoxin of cytochrome c-type biogenesis
STM2247
ccmH
cytochrome C biogenesis protein
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