Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FruR in Yersinia pestis KIM

Properties
Regulator type: Transcription factor
TF locus tag: y3637
Regulator family: LacI
Regulation mode: activator (repressor)
Biological process: Central carbohydrate metabolism
Effector: Fructose-1-phosphate; Fructose-1,6-diphosphate
Regulog: FruR - Enterobacteriales
Statistics of regulated genes:
- Genes 37
- Operons 17
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 213 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -36
Score: 5.3
Sequence: GCTGAAACGATTCAAT
Locus tag: y2887
Name: fruB
Funciton: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69)
Locus tag: y2886
Name: fruK
Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: y2885
Name: fruA
Funciton: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
y2887
fruB
Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69)
y2886
fruK
1-phosphofructokinase (EC 2.7.1.56)
y2885
fruA
PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Position: -309
Score: 4.7
Sequence: GCTGAATGGTGTCAGC
Locus tag: y2023
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
y2023
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -144
Score: 4.9
Sequence: CTTGAATCAATTCAGC
Locus tag: y0059
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
y0059
pfkA
6-phosphofructokinase (EC 2.7.1.11)
Position: -258
Score: 5.1
Sequence: GTTGAATGGTTTCAGC
Locus tag: y1944
Name: pykF
Funciton: Pyruvate kinase (EC 2.7.1.40)
y1944
pykF
Pyruvate kinase (EC 2.7.1.40)
Position: -193
Score: 4.4
Sequence: GGTTGATCGATTCACC
Locus tag: y1930
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
y1930
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -125
Score: 4.6
Sequence: GCTGAAACGTTTTTAT
Locus tag: y1505
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
y1505
glk
Glucokinase (EC 2.7.1.2)
Position: -168
Score: 4.4
Sequence: GCTGATACCTTTCAGC
Locus tag: y3945
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: y3944
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
y3945
nirB
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
y3944
nirD
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Position: -157
Score: 5
Sequence: CCTGAATCGATTCATT
Locus tag: y2551
Name: manX
Funciton: PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69)
Locus tag: y2552
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: y2553
Name: manZ
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
y2551
manX
PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69)
y2552
manY
PTS system, mannose-specific IIC component (EC 2.7.1.69)
y2553
manZ
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -332
Score: 5.1
Sequence: GCTGAATCGATTTACC
Locus tag: y1488
Name: ptsH
Funciton: PTS family, Hpr protein, phosphohistidinoprotein-hexose phosphotransferase
Locus tag: y1487
Name: ptsI
Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
y1488
ptsH
PTS family, Hpr protein, phosphohistidinoprotein-hexose phosphotransferase
y1487
ptsI
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Position: -161
Score: 5.4
Sequence: GCTGAAGCGTTTCAGT
Locus tag: y3309
Name: epd
Funciton: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
Locus tag: y3308
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: y3307
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
y3309
epd
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
y3308
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
y3307
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -257
Score: 4.4
Sequence: ACTGACTCGATTTAGC
Locus tag: y1630
Name: nuoA
Funciton: NADH dehydrogenase I chain A
Locus tag: y1631
Name: nuoB
Funciton: NADH dehydrogenase I chain B
Locus tag: y1632
Name: nuoD
Funciton: NADH dehydrogenase I chain C,D
Locus tag: y1633
Name: nuoE
Funciton: NADH dehydrogenase I chain E
Locus tag: y1634
Name: nuoF
Funciton: NADH dehydrogenase I chain F
Locus tag: y1635
Name: nuoG
Funciton: NADH dehydrogenase I chain G
Locus tag: y1636
Name: nuoH
Funciton: NADH dehydrogenase I chain H
Locus tag: y1637
Name: nuoI
Funciton: NADH dehydrogenase I chain I
Locus tag: y1638
Name: nuoJ
Funciton: NADH dehydrogenase I chain J
Locus tag: y1639
Name: nuoK
Funciton: NADH dehydrogenase I chain K
Locus tag: y1640
Name: nuoL
Funciton: NADH dehydrogenase I chain L
Locus tag: y1641
Name: nuoM
Funciton: NADH dehydrogenase I chain M
Locus tag: y1642
Name: nuoN
Funciton: NADH dehydrogenase I chain N
y1630
nuoA
NADH dehydrogenase I chain A
y1631
nuoB
NADH dehydrogenase I chain B
y1632
nuoD
NADH dehydrogenase I chain C,D
y1633
nuoE
NADH dehydrogenase I chain E
y1634
nuoF
NADH dehydrogenase I chain F
y1635
nuoG
NADH dehydrogenase I chain G
y1636
nuoH
NADH dehydrogenase I chain H
y1637
nuoI
NADH dehydrogenase I chain I
y1638
nuoJ
NADH dehydrogenase I chain J
y1639
nuoK
NADH dehydrogenase I chain K
y1640
nuoL
NADH dehydrogenase I chain L
y1641
nuoM
NADH dehydrogenase I chain M
y1642
nuoN
NADH dehydrogenase I chain N
Position: -164
Score: 4.6
Sequence: GTTGAACCGATTAAGC
Locus tag: y0052
Name: tpiA
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
y0052
tpiA
Triosephosphate isomerase (EC 5.3.1.1)
Position: -178
Score: 5
Sequence: CTTGAAGCGTTTCAGT
Locus tag: y3836
Name: dctA
Funciton: Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate
y3836
dctA
Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate
Position: -255
Score: 4.9
Sequence: GCTGAAGCGATACAAC
Locus tag: y3956
Name: crp
Funciton: Catabolite gene activator (cAMP receptor protein), CRP family
y3956
crp
Catabolite gene activator (cAMP receptor protein), CRP family
Position: -124
Score: 4.6
Sequence: GCTGAATCGGTTAACT
Locus tag: y1802
Name: icdA
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
y1802
icdA
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -78
Score: 3.7
Sequence: ATTGACACGATTCCGC
Locus tag: y2165
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
y2165
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Position: -193
Score: 4.5
Sequence: GCAGAATCGATTCGGC
Locus tag: y3048
Name: gpmA
Funciton: Phosphoglycerate mutase (EC 5.4.2.1)
y3048
gpmA
Phosphoglycerate mutase (EC 5.4.2.1)
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