Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FruR in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM0118
Regulator family: LacI
Regulation mode: activator (repressor)
Biological process: Central carbohydrate metabolism
Effector: Fructose-1-phosphate; Fructose-1,6-diphosphate
Regulog: FruR - Enterobacteriales
Statistics of regulated genes:
- Genes 50
- Operons 24
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 213 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -246
Score: 4.1
Sequence: GCTGAATCGCTTAACG
Locus tag: STM1238
Name: icdA
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
STM1238
icdA
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -265
Score: 4.6
Sequence: GCTGAAAGGTGTCAGC
Locus tag: STM1749
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
STM1749
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -35
Score: 5.4
Sequence: GCTGAATCGTTTCAAT
Locus tag: STM2206
Name: fruB
Funciton: Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69)
Locus tag: STM2205
Name: fruK
Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: STM2204
Name: fruA
Funciton: PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
STM2206
fruB
Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69)
STM2205
fruK
1-phosphofructokinase (EC 2.7.1.56)
STM2204
fruA
PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Position: -122
Score: 5.1
Sequence: CCTGAATCAATTCAGC
Locus tag: STM4062
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
STM4062
pfkA
6-phosphofructokinase (EC 2.7.1.11)
Position: -287
Score: 4.3
Sequence: GGTGAATCGATATTGT
Locus tag: STM3500
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
STM3500
pckA
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Position: -221
Score: 4.9
Sequence: CTTGAATGGTTTCAGC
Locus tag: STM1378
Name: pykF
Funciton: Pyruvate kinase (EC 2.7.1.40)
STM1378
pykF
Pyruvate kinase (EC 2.7.1.40)
Position: -103
Score: 4.6
Sequence: GCTTGAACGATTCACC
Locus tag: STM1349
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
STM1349
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -134
Score: 4
Sequence: GCTGAAACAAGAAAGT
Locus tag: STM2403
Name: glk
Funciton: Glucokinase (EC 2.7.1.2)
STM2403
glk
Glucokinase (EC 2.7.1.2)
Position: -47
Score: 4.6
Sequence: GCTGAATCGTTAAGGT
Locus tag: STM3474
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: STM3475
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
STM3474
nirB
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
STM3475
nirD
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Position: -83
Score: 4.5
Sequence: TCTGAATCGATTCGCT
Locus tag: STM1830
Name: manX
Funciton: PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69)
Locus tag: STM1831
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: STM1832
Name: manZ
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
STM1830
manX
PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69)
STM1831
manY
PTS system, mannose-specific IIC component (EC 2.7.1.69)
STM1832
manZ
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -137
Score: 5.4
Sequence: GCTGAAGCGTTTCAGT
Locus tag: STM3070
Name: epd
Funciton: D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
Locus tag: STM3069
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: STM3068
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
STM3070
epd
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72)
STM3069
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
STM3068
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -124
Score: 4.1
Sequence: AGTTGAACGATTCAGT
Locus tag: STM3685
Name: mtlA
Funciton: mannitol-specific PTS system, IIABC components
STM3685
mtlA
mannitol-specific PTS system, IIABC components
Position: -219
Score: 4.7
Sequence: GCTGAATCGATTTTAT
Locus tag: STM2431
Name: ptsH
Funciton: PTS family, Hpr protein, phosphohistidinoprotein-hexose phosphotransferase
Locus tag: STM2432
Name: ptsI
Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Locus tag: STM2433
Name: crr
Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69)
STM2431
ptsH
PTS family, Hpr protein, phosphohistidinoprotein-hexose phosphotransferase
STM2432
ptsI
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
STM2433
crr
PTS system, glucose-specific IIA component (EC 2.7.1.69)
Position: -225
Score: 4.3
Sequence: GCTGAAGCGAGACACC
Locus tag: STM3466
Name: crp
Funciton: Catabolite gene activator (cAMP receptor protein), CRP family
STM3466
crp
Catabolite gene activator (cAMP receptor protein), CRP family
Position: -325
Score: 4.4
Sequence: TCTGAACCGATTCAAC
Locus tag: STM0150
Name: aroP
Funciton: Aromatic amino acid transport protein AroP
STM0150
aroP
Aromatic amino acid transport protein AroP
Position: -209
Score: 4.1
Sequence: GCTGAACCGATTTCGC
Locus tag: STM4119
Name: ppc
Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
STM4119
ppc
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Position: -250
Score: 4.8
Sequence: CCTAAAGCGTTTCAGC
Locus tag: STM4183
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: STM4184
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
Locus tag: STM4185
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
STM4183
aceB
Malate synthase (EC 2.3.3.9)
STM4184
aceA
Isocitrate lyase (EC 4.1.3.1)
STM4185
aceK
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Position: -113
Score: 4.7
Sequence: CCTGAAACGATTTTGC
Locus tag: STM1885
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: STM1884
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
STM1885
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
STM1884
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -89
Score: 4.3
Sequence: GCTGGCGCGATTCACC
Locus tag: STM4415
Name: fbp
Funciton: Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
STM4415
fbp
Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Position: -283
Score: 3.6
Sequence: ACGGACACGATTCAAC
Locus tag: STM2328
Name: nuoA
Funciton: NADH dehydrogenase I chain A
Locus tag: STM2327
Name: nuoB
Funciton: NADH dehydrogenase I chain B
Locus tag: STM2326
Name: nuoD
Funciton: NADH dehydrogenase I chain C,D
Locus tag: STM2325
Name: nuoE
Funciton: NADH dehydrogenase I chain E
Locus tag: STM2324
Name: nuoF
Funciton: NADH dehydrogenase I chain F
Locus tag: STM2323.S
Name: nuoG
Funciton: NADH dehydrogenase I chain G
Locus tag: STM2322
Name: nuoH
Funciton: NADH dehydrogenase I chain H
Locus tag: STM2321
Name: nuoI
Funciton: NADH dehydrogenase I chain I
Locus tag: STM2320
Name: nuoJ
Funciton: NADH dehydrogenase I chain J
Locus tag: STM2319
Name: nuoK
Funciton: NADH dehydrogenase I chain K
Locus tag: STM2318
Name: nuoL
Funciton: NADH dehydrogenase I chain L
STM2328
nuoA
NADH dehydrogenase I chain A
STM2327
nuoB
NADH dehydrogenase I chain B
STM2326
nuoD
NADH dehydrogenase I chain C,D
STM2325
nuoE
NADH dehydrogenase I chain E
STM2324
nuoF
NADH dehydrogenase I chain F
STM2323.S
nuoG
NADH dehydrogenase I chain G
STM2322
nuoH
NADH dehydrogenase I chain H
STM2321
nuoI
NADH dehydrogenase I chain I
STM2320
nuoJ
NADH dehydrogenase I chain J
STM2319
nuoK
NADH dehydrogenase I chain K
STM2318
nuoL
NADH dehydrogenase I chain L
Position: -163
Score: 4.6
Sequence: GTTGAACCGATTAAGC
Locus tag: STM4081
Name: tpiA
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
STM4081
tpiA
Triosephosphate isomerase (EC 5.3.1.1)
Position: -253
Score: 4.5
Sequence: GTTGAATCGGTTCAGA
Locus tag: STM0151
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase, GntR family
Locus tag: STM0152
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: STM0153
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
STM0151
pdhR
Transcriptional repressor for pyruvate dehydrogenase, GntR family
STM0152
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
STM0153
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Position: -87
Score: 3.7
Sequence: ATTGACACGATTCCGC
Locus tag: STM1290
Name: gapA
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
STM1290
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Position: -66
Score: 4.1
Sequence: ATTTTATCGATTCAGC
Locus tag: STM3704
Name: gpmM
Funciton: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Locus tag: STM3705
Name: yibP
Funciton: murein hydrolase
Locus tag: STM3706
Name: yibQ
Funciton: protein of unknown function DUF610
STM3704
gpmM
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
STM3705
yibP
murein hydrolase
STM3706
yibQ
protein of unknown function DUF610
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