Regulon of PurR in Salmonella typhimurium LT2
| Regulator type: | Transcription factor |
| TF locus tag: | STM1430 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | Hypoxanthine; Guanine |
| Regulog: | PurR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 36 |
| - Operons | 26 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - PurR
- By TF family - LacI
- By effector - Hypoxanthine
- By effector - Guanine
- By pathway - Purine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -123
Score: 5.8 Sequence: GCGCAAACGTTTTCGT
Locus tag: STM4176
Name: purH Funciton: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Locus tag: STM4175
Name: purD Funciton: phosphoribosylamine--glycine ligase |
|||
|
purH
|
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
|
||
|
purD
|
phosphoribosylamine--glycine ligase
|
||
|
Position: -474
Score: 5 Sequence: AAGAAAACGTTTTCGC
Locus tag: STM1780
Name: prs Funciton: ribose-phosphate pyrophosphokinase |
|||
|
prs
|
ribose-phosphate pyrophosphokinase
|
||
|
Position: -58
Score: 5.4 Sequence: AGGCAAACGTTTACCT
Position: 28
Score: 4.3 Sequence: GGGCAAACGTTTCCAC
Locus tag: STM1430
Name: purR Funciton: purine nucleotide synthesis repressor |
|||
|
purR
|
purine nucleotide synthesis repressor
|
||
|
Position: -72
Score: 5.9 Sequence: ACGCAAACGTTTTCTT
Locus tag: STM2363
Name: cvpA Funciton: membrane protein required for colicin V production
Locus tag: STM2362
Name: purF Funciton: amidophosphoribosyltransferase |
|||
|
cvpA
|
membrane protein required for colicin V production
|
||
|
purF
|
amidophosphoribosyltransferase
|
||
|
Position: -68
Score: 4.9 Sequence: TCGCAATCGTTTGCTT
Position: 30
Score: 4.9 Sequence: GCGCAACCGGTTGCGC
Locus tag: STM3747
Name: xanP Funciton: xanthine/uracil permease, NCS2 family |
|||
|
xanP
|
xanthine/uracil permease, NCS2 family
|
||
|
Position: -87
Score: 5.5 Sequence: ACGCAACCGTTTTCCT
Locus tag: STM0534
Name: purE Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit
Locus tag: STM0533
Name: purK Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit |
|||
|
purE
|
phosphoribosylaminoimidazole carboxylase catalytic subunit
|
||
|
purK
|
phosphoribosylaminoimidazole carboxylase ATPase subunit
|
||
|
Position: -22
Score: 4.8 Sequence: AAGCAAACGGTGATTT
Locus tag: STM4366
Name: purA Funciton: adenylosuccinate synthetase |
|||
|
purA
|
adenylosuccinate synthetase
|
||
|
Position: -63
Score: 5.1 Sequence: TCGCAAACGTTTGCTT
Locus tag: STM2499.S
Name: purM Funciton: phosphoribosylformylglycinamidine cyclo-ligase
Locus tag: STM2500
Name: purN Funciton: phosphoribosylglycinamide formyltransferase 1 |
|||
|
purM
|
phosphoribosylformylglycinamidine cyclo-ligase
|
||
|
purN
|
phosphoribosylglycinamide formyltransferase 1
|
||
|
Position: -271
Score: 4.1 Sequence: ACGATAACGTTTGCGC
Position: -128
Score: 3.9 Sequence: AGCTAAACGTTTGCTT
Locus tag: STM4268
Name: yjcD Funciton: putative xanthine/uracil permease |
|||
|
yjcD
|
putative xanthine/uracil permease
|
||
|
Position: -51
Score: 6 Sequence: ACGCAAACGTTTTCGT
Locus tag: STM1883
Name: purT Funciton: phosphoribosylglycinamide formyltransferase 2 |
|||
|
purT
|
phosphoribosylglycinamide formyltransferase 2
|
||
|
Position: -90
Score: 5.9 Sequence: ACGCAAACGGTTTCGT
Locus tag: STM2565
Name: purL Funciton: phosphoribosylformylglycinamidine synthase |
|||
|
purL
|
phosphoribosylformylglycinamidine synthase
|
||
|
Position: -68
Score: 5.3 Sequence: ATGCAACCGATTACGT
Locus tag: STM2511
Name: guaB Funciton: inosine-5'-monophosphate dehydrogenase
Locus tag: STM2510
Name: guaA Funciton: GMP synthase |
|||
|
guaB
|
inosine-5'-monophosphate dehydrogenase
|
||
|
guaA
|
GMP synthase
|
||
|
Position: -131
Score: 5 Sequence: ACGCAAACGTGTGCGT
Locus tag: STM2487
Name: purC Funciton: phosphoribosylaminoimidazole-succinocarboxamidesynthase |
|||
|
purC
|
phosphoribosylaminoimidazole-succinocarboxamidesynthase
|
||
|
Position: -108
Score: 3.7 Sequence: AGGTTAACGATTGCGT
Locus tag: STM3579
Name: yhhQ Funciton: conserved inner membrane protein |
|||
|
yhhQ
|
conserved inner membrane protein
|
||
|
Position: -102
Score: 4.2 Sequence: GCGCAAACGTTCATAT
Locus tag: STM3062
Name: serA Funciton: D-3-phosphoglycerate dehydrogenase |
|||
|
serA
|
D-3-phosphoglycerate dehydrogenase
|
||
|
Position: -236
Score: 5.1 Sequence: GCGCAAGCGTTTTCTA
Locus tag: STM0066
Name: carA Funciton: carbamoyl-phosphate synthase small subunit
Locus tag: STM0067
Name: carB Funciton: carbamoyl-phosphate synthase large subunit |
|||
|
carA
|
carbamoyl-phosphate synthase small subunit
|
||
|
carB
|
carbamoyl-phosphate synthase large subunit
|
||
|
Position: -101
Score: 4 Sequence: AGGAAAACGATTGCTA
Locus tag: STM1058
Name: pyrD Funciton: dihydroorotate dehydrogenase |
|||
|
pyrD
|
dihydroorotate dehydrogenase
|
||
|
Position: -65
Score: 4.6 Sequence: ACGAAAACGTTTCCGC
Locus tag: STM1163
Name: pyrC Funciton: dihydroorotase |
|||
|
pyrC
|
dihydroorotase
|
||
|
Position: -74
Score: 4.8 Sequence: ACGAAAACGTTTGCTT
Locus tag: STM3333
Name: codB Funciton: cytosine permease
Locus tag: STM3334
Name: codA Funciton: cytosine deaminase |
|||
|
codB
|
cytosine permease
|
||
|
codA
|
cytosine deaminase
|
||
|
Position: -132
Score: 4.5 Sequence: AGGTAATCGTTTGCGT
Locus tag: STM2555
Name: glyA Funciton: serine/glycine hydroxymethyltransferase |
|||
|
glyA
|
serine/glycine hydroxymethyltransferase
|
||
|
Position: 184
Score: 5.5 Sequence: ACGCAAACGGTTACCT
Locus tag: STM1232
Name: purB Funciton: adenylosuccinate lyase |
|||
|
purB
|
adenylosuccinate lyase
|
||
|
Position: -89
Score: 4.3 Sequence: ACACAAACGTTAACTG
Locus tag: STM0542
Name: folD Funciton: 5,10-methylene-tetrahydrofolate dehydrogenase
Locus tag: STM0541
Name: ybcJ Funciton: hypothetical protein |
|||
|
folD
|
5,10-methylene-tetrahydrofolate dehydrogenase
|
||
|
ybcJ
|
hypothetical protein
|
||
|
Position: -166
Score: 4.4 Sequence: GCGCAAACGTGAACGC
Position: -154
Score: 5.6 Sequence: ACGCAATCGATTACGT
Locus tag: STM0413
Name: tsx Funciton: nucleoside-specific channel-forming protein |
|||
|
tsx
|
nucleoside-specific channel-forming protein
|
||
|
Position: -118
Score: 4.9 Sequence: ACGCAATCGTTGCCGT
Locus tag: STM3851.S
Name: purP Funciton: high affinity adenine permease |
|||
|
purP
|
high affinity adenine permease
|
||
|
Position: -100
Score: 5 Sequence: ACGCAAACGATTAAGC
Locus tag: STM1365
Name: ydiJ Funciton: predicted FAD-linked oxidoreductase |
|||
|
ydiJ
|
predicted FAD-linked oxidoreductase
|
||
|
Position: -108
Score: 4 Sequence: AAGAGAACGTTTGCGT
Locus tag: STM3055
Name: gcvT Funciton: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
Locus tag: STM3054
Name: gcvH Funciton: Glycine cleavage system, aminomethyl moiety carrier protein
Locus tag: STM3053
Name: gcvP Funciton: Glycine cleavage system, glycine decarboxylating dehydrogenase (EC 1.4.4.2) |
|||
|
gcvT
|
Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
|
||
|
gcvH
|
Glycine cleavage system, aminomethyl moiety carrier protein
|
||
|
gcvP
|
Glycine cleavage system, glycine decarboxylating dehydrogenase (EC 1.4.4.2)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |