Regulon of PurR in Photorhabdus luminescens subsp. laumondii TTO1
| Regulator type: | Transcription factor |
| TF locus tag: | plu2605 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | Hypoxanthine; Guanine |
| Regulog: | PurR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 25 |
| - Operons | 15 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - PurR
- By TF family - LacI
- By effector - Hypoxanthine
- By effector - Guanine
- By pathway - Purine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -68
Score: 5.3 Sequence: ACGCAAACGATTGCTT
Locus tag: plu0247
Name: xanP Funciton: xanthine/uracil permease, NCS2 family |
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xanP
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xanthine/uracil permease, NCS2 family
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Position: -283
Score: 6 Sequence: ACGCAAACGTTTTCGT
Locus tag: plu0495
Name: purH Funciton: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Locus tag: plu0494
Name: purD Funciton: phosphoribosylamine--glycine ligase |
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purH
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phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
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purD
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phosphoribosylamine--glycine ligase
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Position: -72
Score: 6 Sequence: ACGCAAACGTTTTCGT
Locus tag: plu3168
Name: cvpA Funciton: membrane protein required for colicin V production
Locus tag: plu3167
Name: purF Funciton: amidophosphoribosyltransferase
Locus tag: plu3166
Name: ubiX Funciton: 3-octaprenyl-4-hydroxybenzoate decarboxylase |
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cvpA
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membrane protein required for colicin V production
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purF
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amidophosphoribosyltransferase
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ubiX
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3-octaprenyl-4-hydroxybenzoate decarboxylase
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Position: -99
Score: 5.5 Sequence: ACGCAATCGTTTTCCT
Locus tag: plu3807
Name: purE Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit
Locus tag: plu3808
Name: purK Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit |
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purE
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phosphoribosylaminoimidazole carboxylase catalytic subunit
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purK
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phosphoribosylaminoimidazole carboxylase ATPase subunit
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Position: -80
Score: 5.1 Sequence: TCGCAAACGTTTGCTT
Locus tag: plu2760
Name: purM Funciton: phosphoribosylformylglycinamidine cyclo-ligase
Locus tag: plu2761
Name: purN Funciton: phosphoribosylglycinamide formyltransferase 1 |
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purM
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phosphoribosylformylglycinamidine cyclo-ligase
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purN
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phosphoribosylglycinamide formyltransferase 1
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Position: -91
Score: 5.9 Sequence: ACGCAAACGGTTTCGT
Locus tag: plu3317
Name: purL Funciton: phosphoribosylformylglycinamidine synthase |
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purL
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phosphoribosylformylglycinamidine synthase
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Position: -80
Score: 5.3 Sequence: AGGCAACCGATTACGT
Locus tag: plu2713
Name: guaB Funciton: inosine-5'-monophosphate dehydrogenase
Locus tag: plu2712
Name: guaA Funciton: GMP synthase |
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guaB
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inosine-5'-monophosphate dehydrogenase
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guaA
|
GMP synthase
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Position: -91
Score: 4.3 Sequence: TAGCAATCGTTTATAT
Locus tag: plu3605
Name: serA Funciton: D-3-phosphoglycerate dehydrogenase |
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serA
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D-3-phosphoglycerate dehydrogenase
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Position: -295
Score: 4.5 Sequence: AAGAAAACGTTTCCGT
Locus tag: plu2066
Name: prs Funciton: ribose-phosphate pyrophosphokinase |
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prs
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ribose-phosphate pyrophosphokinase
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Position: -126
Score: 5.2 Sequence: ATGCAATCGTTTGCGT
Locus tag: plu3291
Name: glyA Funciton: serine/glycine hydroxymethyltransferase |
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glyA
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serine/glycine hydroxymethyltransferase
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Position: 184
Score: 5 Sequence: ACGCAAACGCTTACCT
Locus tag: plu2806
Name: purB Funciton: adenylosuccinate lyase |
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purB
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adenylosuccinate lyase
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Position: 21
Score: 4.1 Sequence: GGGAAAACGATTGCGC
Locus tag: plu4317
Name: folD Funciton: 5,10-methylene-tetrahydrofolate dehydrogenase
Locus tag: plu4316
Name: ybcJ Funciton: hypothetical protein |
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folD
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5,10-methylene-tetrahydrofolate dehydrogenase
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ybcJ
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hypothetical protein
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Position: -129
Score: 3.7 Sequence: AGGTAAACGCTTGCCT
Locus tag: plu2626
Name: ydiJ Funciton: predicted FAD-linked oxidoreductase
Locus tag: plu2625
Name: ydiI Funciton: thioesterase superfamily protein |
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ydiJ
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predicted FAD-linked oxidoreductase
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ydiI
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thioesterase superfamily protein
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Position: -114
Score: 4.3 Sequence: AGCCAAACGATTGCTT
Position: -41
Score: 4.9 Sequence: AGGTAATCGTTTTCGT
Locus tag: plu4423
Name: yjcD Funciton: putative xanthine/uracil permease |
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yjcD
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putative xanthine/uracil permease
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Position: -108
Score: 3.8 Sequence: AAGATATCGTTTGCGT
Locus tag: plu3598
Name: gcvT Funciton: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
Locus tag: plu3597
Name: gcvH Funciton: Glycine cleavage system, aminomethyl moiety carrier protein
Locus tag: plu3596
Name: gcvP Funciton: Glycine cleavage system, glycine decarboxylating dehydrogenase (EC 1.4.4.2) |
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gcvT
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Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
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gcvH
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Glycine cleavage system, aminomethyl moiety carrier protein
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gcvP
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Glycine cleavage system, glycine decarboxylating dehydrogenase (EC 1.4.4.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |