Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Yersinia pestis KIM

Properties
Regulator type: Transcription factor
TF locus tag: y3956
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Enterobacteriales
Statistics of regulated genes:
- Genes 214
- Operons 121
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 2301 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -309
Score: 3
Sequence: AATTTAGACTACCCTTTCATTT
Locus tag: y3956
Name: crp
Funciton: cyclic AMP receptor protein
y3956
crp
cyclic AMP receptor protein
Position: -89
Score: 4.8
Sequence: ACATGTGACCTGGATCAAATTT
Locus tag: y1362
Name: guaB
Funciton: inosine-5'-monophosphate dehydrogenase
Locus tag: y1363
Name: guaA
Funciton: bifunctional GMP synthase/glutamine amidotransferase protein
y1362
guaB
inosine-5'-monophosphate dehydrogenase
y1363
guaA
bifunctional GMP synthase/glutamine amidotransferase protein
Position: -223
Score: 4.6
Sequence: AGATGTGATCTTAATCAACAAA
Position: -179
Score: 4.5
Sequence: TTGTGTGACTTTCGTCACGAAA
Locus tag: y4087
Name: mtlA
Funciton: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: y4086
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Locus tag: y4085
Name: mtlR
Funciton: Mannitol operon repressor
y4087
mtlA
PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
y4086
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
y4085
mtlR
Mannitol operon repressor
Position: -262
Score: 3.4
Sequence: TAATCTAATCATCATCAAACAC
Locus tag: y0834
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
y0834
rpoS
RNA polymerase sigma factor RpoS
Position: -55
Score: 5.1
Sequence: ATGTGTGATCTAAATCACTTTT
Locus tag: y0180
Name: aaeR
Funciton: LysR-family transcriptional regulator
y0180
aaeR
LysR-family transcriptional regulator
Position: -97
Score: 4.2
Sequence: ATACGTGATCTGCCGCCCAAAA
Locus tag: y0510
Name: acs
Funciton: acetyl-coenzyme A synthetase
Locus tag: y0509
Name: yjcH
Funciton: membrane protein
Locus tag: y0508
Name: actP
Funciton: acetate permease
y0510
acs
acetyl-coenzyme A synthetase
y0509
yjcH
membrane protein
y0508
actP
acetate permease
Position: -286
Score: 5.3
Sequence: TTTTGTGATTTAAATCACGAAA
Locus tag: y2023
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
y2023
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -146
Score: 4.3
Sequence: ACTTTTGACTGACATCACAAAA
Locus tag: y2095
Name: araB
Funciton: L-ribulokinase
Locus tag: y2094
Name: araA
Funciton: L-arabinose isomerase
y2095
araB
L-ribulokinase
y2094
araA
L-arabinose isomerase
Position: -283
Score: 4.3
Sequence: TTTTGTGATGTCAGTCAAAAGT
Locus tag: y2096
Name: araF
Funciton: L-arabinose-binding periplasmic protein
Locus tag: y2097
Name: araG
Funciton: L-arabinose transporter ATP-binding protein
Locus tag: y2098
Name: araH
Funciton: L-arabinose transporter permease protein
y2096
araF
L-arabinose-binding periplasmic protein
y2097
araG
L-arabinose transporter ATP-binding protein
y2098
araH
L-arabinose transporter permease protein
Position: -223
Score: 3.6
Sequence: TATTTTTATTTATGTCAATAAA
Locus tag: y0309
Name: argE
Funciton: acetylornithine deacetylase
y0309
argE
acetylornithine deacetylase
Position: -249
Score: 3.7
Sequence: TAATTCTAGCGAGATCACAGTT
Locus tag: y3303
Name: iciA
Funciton: chromosome replication initiation inhibitor protein
y3303
iciA
chromosome replication initiation inhibitor protein
Position: -300
Score: 4
Sequence: ATTAATGAGATAGCGCACATTA
Locus tag: y0667
Name: argR
Funciton: arginine repressor
y0667
argR
arginine repressor
Position: -64
Score: 4.3
Sequence: TATTGTGATCGCCATCACTTCC
Locus tag: y1928
Name: aroH
Funciton: phospho-2-dehydro-3-deoxyheptonate aldolase
y1928
aroH
phospho-2-dehydro-3-deoxyheptonate aldolase
Position: -224
Score: 4.6
Sequence: AAGTGTGAGAGCAATCACAGAT
Locus tag: y0606
Name: aspA
Funciton: aspartate ammonia-lyase
Locus tag: y0605
Name: dcuA
Funciton: anaerobic C-4-dicarboxylate symporter
y0606
aspA
aspartate ammonia-lyase
y0605
dcuA
anaerobic C-4-dicarboxylate symporter
Position: -263
Score: 5.4
Sequence: TTATGTGATGTATTTCACGTTT
Locus tag: y4142
Name: atpI
Funciton: ATP synthase subunit I
Locus tag: y4141
Name: atpB
Funciton: ATP synthase subunit A
Locus tag: y4140
Name: atpE
Funciton: ATP synthase subunit C
Locus tag: y4139
Name: atpF
Funciton: ATP synthase subunit B
Locus tag: y4138
Name: atpH
Funciton: ATP synthase subunit D
Locus tag: y4137
Name: atpA
Funciton: ATP synthase subunit A
Locus tag: y4136
Name: atpG
Funciton: ATP synthase subunit C
Locus tag: y4135
Name: atpD
Funciton: ATP synthase subunit B
Locus tag: y4134
Name: atpC
Funciton: ATP synthase epsilon subunit
y4142
atpI
ATP synthase subunit I
y4141
atpB
ATP synthase subunit A
y4140
atpE
ATP synthase subunit C
y4139
atpF
ATP synthase subunit B
y4138
atpH
ATP synthase subunit D
y4137
atpA
ATP synthase subunit A
y4136
atpG
ATP synthase subunit C
y4135
atpD
ATP synthase subunit B
y4134
atpC
ATP synthase epsilon subunit
Position: -75
Score: 5
Sequence: TAATGAGATATAAATCACAATT
Locus tag: y2657
Name: cdd
Funciton: cytidine deaminase
y2657
cdd
cytidine deaminase
Position: -214
Score: 4.5
Sequence: TTTTGCGATAACCATCACATTG
Locus tag: y1251
Name: chbB
Funciton: N,N'-diacetylchitobiose-specific PTS system , EIIB component
Locus tag: y1252
Name: chbC
Funciton: N,N'-diacetylchitobiose-specific PTS system , EIIC component
Locus tag: y1253
Name: chbA
Funciton: N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA
Locus tag: y1254
Name: chbR
Funciton: DNA-binding transcriptional dual regulator
Locus tag: y1255
Name: chbG
Funciton: hypothetical protein
y1251
chbB
N,N'-diacetylchitobiose-specific PTS system , EIIB component
y1252
chbC
N,N'-diacetylchitobiose-specific PTS system , EIIC component
y1253
chbA
N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA
y1254
chbR
DNA-binding transcriptional dual regulator
y1255
chbG
hypothetical protein
Position: -259
Score: 3.8
Sequence: AAATGTGATCGGGCGTAAAACA
Locus tag: y0757
Name: coaE
Funciton: dephospho-CoA kinase
Locus tag: y0756
Name: yacF
Funciton: hypothetical protein
Locus tag: y0755
Name: yacG
Funciton: zinc-binding protein
y0757
coaE
dephospho-CoA kinase
y0756
yacF
hypothetical protein
y0755
yacG
zinc-binding protein
Position: -148
Score: 3.6
Sequence: AACTGTGAGCGTCTACGCGTTA
Position: -116
Score: 3.8
Sequence: TTTTCTGCCAAACTTCACACTT
Position: -63
Score: 4.4
Sequence: TTTTGCGATACATATCGAATAT
Locus tag: y0653
Name: cpdB
Funciton: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
y0653
cpdB
2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
Position: -199
Score: 4.5
Sequence: CACTGTGATGTACTTAACAAAA
Position: -118
Score: 3.7
Sequence: TAATATTAAATTATTCGCAAAT
Locus tag: y2447
Name: cycA2
Funciton: D-alanine/D-serine/glycine permease
y2447
cycA2
D-alanine/D-serine/glycine permease
Position: -137
Score: 4.5
Sequence: ATCTGTGACCCCCTTAACATAA
Locus tag: y1021
Name: cyoA
Funciton: cytochrome o ubiquinol oxidase subunit II
Locus tag: y1020
Name: cyoB
Funciton: cytochrome o ubiquinol oxidase subunit I
Locus tag: y1019
Name: cyoC
Funciton: cytochrome o ubiquinol oxidase subunit III
Locus tag: y1018
Name: cyoE
Funciton: protoheme IX farnesyltransferase
y1021
cyoA
cytochrome o ubiquinol oxidase subunit II
y1020
cyoB
cytochrome o ubiquinol oxidase subunit I
y1019
cyoC
cytochrome o ubiquinol oxidase subunit III
y1018
cyoE
protoheme IX farnesyltransferase
Position: -177
Score: 3.7
Sequence: TTCTGCGAGCCAGTTCGAAAAA
Position: -135
Score: 3.6
Sequence: TTATGCAAATTAGGTAACAAAT
Locus tag: y0297
Name: cytR
Funciton: transcriptional repressor
y0297
cytR
transcriptional repressor
Position: -96
Score: 4.8
Sequence: TAATTTGAGCCGGTTCACACTT
Locus tag: y0696
Name: deaD
Funciton: ATP-independent RNA helicase
y0696
deaD
ATP-independent RNA helicase
Position: -169
Score: 3.7
Sequence: TGCGGTGAGATGGATCTCAATT
Locus tag: y3743
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: y3742
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: y3741
Name: deoB
Funciton: phosphopentomutase
Locus tag: y3740
Name: deoD
Funciton: purine nucleoside phosphorylase
y3743
deoC
2-deoxyribose-5-phosphate aldolase
y3742
deoA
thymidine phosphorylase
y3741
deoB
phosphopentomutase
y3740
deoD
purine nucleoside phosphorylase
Position: -211
Score: 3.9
Sequence: AGATGTGAGCCATATAACCTCT
Locus tag: y3825
Name: dppA
Funciton: dipeptide ABC transporter, substrate-binding protein
Locus tag: y3826
Name: dppB
Funciton: dipeptide ABC transporter, permease protein
Locus tag: y3828
Name: dppC
Funciton: dipeptide transporter
Locus tag: y3829
Name: dppD
Funciton: dipeptide transporter ATP-binding subunit
Locus tag: y3830
Name: dppF
Funciton: dipeptide transporter ATP-binding subunit
y3825
dppA
dipeptide ABC transporter, substrate-binding protein
y3826
dppB
dipeptide ABC transporter, permease protein
y3828
dppC
dipeptide transporter
y3829
dppD
dipeptide transporter ATP-binding subunit
y3830
dppF
dipeptide transporter ATP-binding subunit
Position: -57
Score: 4.3
Sequence: TAACGTGATGTTATTTATAATT
Locus tag: y0213
Name: dusB
Funciton: tRNA-dihydrouridine synthase B
Locus tag: y0214
Name: fis
Funciton: DNA-binding protein Fis
y0213
dusB
tRNA-dihydrouridine synthase B
y0214
fis
DNA-binding protein Fis
Position: -216
Score: 3.7
Sequence: AATTGTGCCCTTTTTCAGGGAA
Locus tag: y3309
Name: epd
Funciton: D-erythrose 4-phosphate dehydrogenase
Locus tag: y3308
Name: pgk
Funciton: phosphoglycerate kinase
y3309
epd
D-erythrose 4-phosphate dehydrogenase
y3308
pgk
phosphoglycerate kinase
Position: -149
Score: 3.9
Sequence: AAATATGATAAAGATCAATTAG
Position: -116
Score: 3.7
Sequence: GATTGTGATCTTCACTGCAAAA
Locus tag: y0464
Name: fadB
Funciton: 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase
y0464
fadB
4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase
Position: -80
Score: 4.1
Sequence: AATAGTGATGTATATCTCAACC
Locus tag: y2236
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
y2236
fadD
long-chain-fatty-acid--CoA ligase
Position: -73
Score: 3.7
Sequence: TGTTGTGTTTGTTATCGAACTA
Locus tag: y2235
Name: rnd
Funciton: ribonuclease D
y2235
rnd
ribonuclease D
Position: -131
Score: 4
Sequence: ATTCATGACGGCTATCACAATC
Locus tag: y3589
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
y3589
fadH
2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
Position: -113
Score: 3.8
Sequence: CTTTATGACTGCTTTCACCATT
Locus tag: y2177
Name: fadR
Funciton: fatty acid metabolism regulator
y2177
fadR
fatty acid metabolism regulator
Position: -84
Score: 4
Sequence: CAATATGATCCATATCAATTTT
Locus tag: y2789
Name: focA
Funciton: formate transporter
Locus tag: y2790
Name: pflB
Funciton: formate acetyltransferase
y2789
focA
formate transporter
y2790
pflB
formate acetyltransferase
Position: -178
Score: 4.1
Sequence: AAATGTGCGGAATGTCAAAAAT
Locus tag: y2887
Name: fruB
Funciton: PTS system, fructose-specific IIA/FPr component
Locus tag: y2886
Name: fruK
Funciton: 1-phosphofructokinase
Locus tag: y2885
Name: fruA
Funciton: PTS system, fructose-specific IIBC component
y2887
fruB
PTS system, fructose-specific IIA/FPr component
y2886
fruK
1-phosphofructokinase
y2885
fruA
PTS system, fructose-specific IIBC component
Position: -258
Score: 4.5
Sequence: AATTGGGATATTGCTCACAAAG
Locus tag: y3777
Name: frwC
Funciton: hypothetical protein
y3777
frwC
hypothetical protein
Position: -245
Score: 4.8
Sequence: ATCTGTGATTGCTCTCACACTT
Locus tag: y0607
Name: fxsA
Funciton: suppressor of F plamsid exlusion of phage T7
y0607
fxsA
suppressor of F plamsid exlusion of phage T7
Position: -163
Score: 3.7
Sequence: TTATTTGTCTATGCTCACAGAA
Locus tag: y3043
Name: galE2
Funciton: UDP-galactose-4-epimerase
Locus tag: y3044
Name: galT
Funciton: galactose-1-phosphate uridylyltransferase
Locus tag: y3045
Name: galK
Funciton: galactokinase
Locus tag: y3046
Name: galM
Funciton: aldose 1-epimerase
y3043
galE2
UDP-galactose-4-epimerase
y3044
galT
galactose-1-phosphate uridylyltransferase
y3045
galK
galactokinase
y3046
galM
aldose 1-epimerase
Position: -218
Score: 5.1
Sequence: AAATGTGATAAAAATCGCAAAT
Locus tag: y2165
Name: gapA
Funciton: glyceraldehyde-3-phosphate dehydrogenase
Locus tag: y2166
Name: yeaD
Funciton: Aldose 1-epimerase
y2165
gapA
glyceraldehyde-3-phosphate dehydrogenase
y2166
yeaD
Aldose 1-epimerase
Position: -299
Score: 5.4
Sequence: TAATGTGACTTTGTTCACATTA
Position: -122
Score: 3.8
Sequence: TTCTTTGAAAGAATTCTCATAA
Position: -21
Score: 4.9
Sequence: TAATTTGAGGGAGATCACAAAA
Locus tag: y3231
Name: CKO_02295
Funciton: hypothetical protein
y3231
CKO_02295
hypothetical protein
Position: -113
Score: 4.7
Sequence: TTATGAGATGTCAGTCACAAAA
Locus tag: y1505
Name: glk
Funciton: glucokinase
y1505
glk
glucokinase
Position: -231
Score: 3.6
Sequence: AATTGTTACCTATTTTATGAAA
Position: -155
Score: 4.4
Sequence: ACCTGTGATTTTGATCACAATC
Locus tag: y0404
Name: glpA
Funciton: sn-glycerol-3-phosphate dehydrogenase subunit A
Locus tag: y0405
Name: glpB
Funciton: Glycerol-3-phosphate dehydrogenase subunit B
Locus tag: y0406
Name: glpC
Funciton: anaerobic glycerol-3-phosphate dehydrogenase subunit C
y0404
glpA
sn-glycerol-3-phosphate dehydrogenase subunit A
y0405
glpB
Glycerol-3-phosphate dehydrogenase subunit B
y0406
glpC
anaerobic glycerol-3-phosphate dehydrogenase subunit C
Position: -129
Score: 4.4
Sequence: AAATGTTACCTCCATCACGCAT
Locus tag: y3891
Name: glpD
Funciton: glycerol-3-phosphate dehydrogenase
y3891
glpD
glycerol-3-phosphate dehydrogenase
Position: -139
Score: 4
Sequence: TTTCATGACGAATAACACATAT
Locus tag: y0046
Name: glpF
Funciton: facilitator for glycerol uptake
Locus tag: y0047
Name: glpK
Funciton: glycerol kinase
y0046
glpF
facilitator for glycerol uptake
y0047
glpK
glycerol kinase
Position: -268
Score: 3.8
Sequence: TGGTGCGATTCGTGTCTCAAAA
Locus tag: y1189
Name: glnH2
Funciton: glutamate and aspartate transporter subunit
Locus tag: y1188
Name: gltJ
Funciton: glutamate/aspartate ABC transporter, permease protein
Locus tag: y1187
Name: gltK
Funciton: glutamate/aspartate ABC transporter, permease protein
Locus tag: y1186
Name: gltL
Funciton: ABC transporter-related protein
y1189
glnH2
glutamate and aspartate transporter subunit
y1188
gltJ
glutamate/aspartate ABC transporter, permease protein
y1187
gltK
glutamate/aspartate ABC transporter, permease protein
y1186
gltL
ABC transporter-related protein
Position: -148
Score: 3.8
Sequence: ATTTTTTTGCTAACTCACATTT
Locus tag: y0106
Name: gltS
Funciton: sodium/glutamate symporter
y0106
gltS
sodium/glutamate symporter
Position: -78
Score: 3.8
Sequence: AGTTGTGCTATCTATCGCACCA
Position: -76
Score: 3.6
Sequence: TTGTGCTATCTATCGCACCAAT
Locus tag: y2629
Name: gnd
Funciton: gluconate-6-phosphate dehydrogenase
y2629
gnd
gluconate-6-phosphate dehydrogenase
Position: -86
Score: 4.8
Sequence: AATTGTTATCAAGATCACGAAT
Locus tag: y2547
Name: hpaG
Funciton: 4-hydroxyphenylacetate catabolism
Locus tag: y2546
Name: hpaE
Funciton: 4-hydroxyphenylacetate catabolism
Locus tag: y2545
Name: hpaD
Funciton: 4-hydroxyphenylacetate catabolism
Locus tag: y2544
Name: hpaF
Funciton: 4-hydroxyphenylacetate catabolism
y2547
hpaG
4-hydroxyphenylacetate catabolism
y2546
hpaE
4-hydroxyphenylacetate catabolism
y2545
hpaD
4-hydroxyphenylacetate catabolism
y2544
hpaF
4-hydroxyphenylacetate catabolism
Position: -253
Score: 5
Sequence: ATTCGTGATCTTGATAACAATT
Locus tag: y2548
Name: hpaR
Funciton: 4-hydroxyphenylacetate catabolism
y2548
hpaR
4-hydroxyphenylacetate catabolism
Position: -261
Score: 4.9
Sequence: ATATGTGATTTGGTGCGCAAAT
Locus tag: y4038
Name: hutU
Funciton: urocanate hydratase
Locus tag: y4037
Name: hutH
Funciton: histidine ammonia-lyase
y4038
hutU
urocanate hydratase
y4037
hutH
histidine ammonia-lyase
Position: -299
Score: 5.4
Sequence: TAATGTGACTTTGTTCACATTA
Position: -122
Score: 3.8
Sequence: TTCTTTGAAAGAATTCTCATAA
Position: -21
Score: 4.9
Sequence: TAATTTGAGGGAGATCACAAAA
Locus tag: y3231
Name: CKO_02295
Funciton: hypothetical protein
y3231
CKO_02295
hypothetical protein
Position: -168
Score: 4
Sequence: ACATGTGCGACAGATCACATTC
Locus tag: y1817
Name: lacZ
Funciton: beta-D-galactosidase
y1817
lacZ
beta-D-galactosidase
Position: -92
Score: 3.7
Sequence: GATTGTGATAAATCACTCACTA
Locus tag: y1449
Name: maeB
Funciton: malic enzyme
y1449
maeB
malic enzyme
Position: -286
Score: 4.2
Sequence: TATTGTGCCTAACACCACAAAA
Position: -257
Score: 4
Sequence: CAGTGTTAACTGAGTCACAATA
Locus tag: y0028
Name: malE
Funciton: maltose ABC transporter periplasmic protein
Locus tag: y0027
Name: malF
Funciton: ABC superfamily (membrane), maltose transport protein
Locus tag: y0026
Name: malG
Funciton: ABC superfamily (membrane), maltose transport protein
y0028
malE
maltose ABC transporter periplasmic protein
y0027
malF
ABC superfamily (membrane), maltose transport protein
y0026
malG
ABC superfamily (membrane), maltose transport protein
Position: -137
Score: 4.1
Sequence: TAAGTTGCTACGGATCACAATT
Locus tag: y3901
Name: malP
Funciton: maltodextrin phosphorylase
Locus tag: y3902
Name: malQ
Funciton: 4-alpha-glucanotransferase
y3901
malP
maltodextrin phosphorylase
y3902
malQ
4-alpha-glucanotransferase
Position: -202
Score: 4.6
Sequence: AATTGTGATCCGTAGCAACTTA
Locus tag: y3900
Name: malT
Funciton: transcriptional regulator MalT
y3900
malT
transcriptional regulator MalT
Position: -231
Score: 3.9
Sequence: ATAGATGAGCAATGTCACATAA
Locus tag: y2551
Name: manX
Funciton: PTS enzyme IIAB, mannose-specific
Locus tag: y2552
Name: manY
Funciton: PTS system, mannose/fructose/sorbose family, IIC subunit
Locus tag: y2553
Name: manZ
Funciton: PTS enzyme IID, mannose-specific
Locus tag: y2554
Name: yobD
Funciton: hypothetical protein
y2551
manX
PTS enzyme IIAB, mannose-specific
y2552
manY
PTS system, mannose/fructose/sorbose family, IIC subunit
y2553
manZ
PTS enzyme IID, mannose-specific
y2554
yobD
hypothetical protein
Position: -212
Score: 4.4
Sequence: ATCTGTGAGAAAATTCACAGTT
Locus tag: y2662
Name: mglB
Funciton: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Locus tag: y2661
Name: mglA
Funciton: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Locus tag: y2660
Name: mglC
Funciton: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
y2662
mglB
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
y2661
mglA
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
y2660
mglC
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
Position: -214
Score: 5.1
Sequence: TTTTGTGATAAATATCACCAAA
Locus tag: y1202
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: y1201
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: y1200
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: y1199
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
y1202
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
y1201
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
y1200
nagC
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
y1199
nagD
Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
Position: -206
Score: 4.9
Sequence: TTTGGTGATATTTATCACAAAA
Locus tag: y1203
Name: nagE
Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
y1203
nagE
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -152
Score: 3.8
Sequence: AAAGTTGATATATATCAATTTT
Locus tag: y1777
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
y1777
ndh
NADH dehydrogenase (EC 1.6.99.3)
Position: -147
Score: 4.1
Sequence: AAATGTGATATGCGTTATCAAT
Locus tag: y3704
Name: nhaA
Funciton: Na+/H+ antiporter NhaA type
y3704
nhaA
Na+/H+ antiporter NhaA type
Position: -247
Score: 4.5
Sequence: CAATGTGATCAAGTTCTAATAT
Locus tag: y3923
Name: nudE
Funciton: ADP compounds hydrolase NudE (EC 3.6.1.-)
y3923
nudE
ADP compounds hydrolase NudE (EC 3.6.1.-)
Position: -136
Score: 4.4
Sequence: TTATGTGATCAAGCCCACTAAT
Position: -84
Score: 3.9
Sequence: ATTTGTGGTTCACATCTCTTTT
Locus tag: y1499
Name: nupC
Funciton: Nucleoside permease NupC
y1499
nupC
Nucleoside permease NupC
Position: -154
Score: 3.8
Sequence: CTTTGTCAATAACCTCACATAT
Position: -115
Score: 5.5
Sequence: TAATGTGATTATGATCACATTT
Locus tag: y3744
Name: nupC2
Funciton: Na+ dependent nucleoside transporter
y3744
nupC2
Na+ dependent nucleoside transporter
Position: -69
Score: 3.9
Sequence: AGATGTGATCTCGATTAGATCA
Locus tag: y2044
Name: ompW
Funciton: outer membrane protein W
y2044
ompW
outer membrane protein W
Position: -130
Score: 4.2
Sequence: ATTCGTGTTCCATCTCTCATAA
Position: -80
Score: 3.8
Sequence: ATATTTGATAGCTATCGCTGTT
Locus tag: y3918
Name: pck
Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
y3918
pck
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Position: -27
Score: 3.7
Sequence: ATATTTGATCATGATCACTTCC
Locus tag: y1791
Name: pepT
Funciton: peptidase T
y1791
pepT
peptidase T
Position: -144
Score: 4.8
Sequence: AGTTGTGCTATGGCTCACAAAA
Locus tag: y0400
Name: pldB
Funciton: Lysophospholipase L2 (EC 3.1.1.5)
Locus tag: y0401
Name: yigL
Funciton: Hydrolase (HAD superfamily)
y0400
pldB
Lysophospholipase L2 (EC 3.1.1.5)
y0401
yigL
Hydrolase (HAD superfamily)
Position: -151
Score: 4.2
Sequence: AAATGTGCTGGGTTTCATGATT
Position: -139
Score: 3.3
Sequence: TTTCATGATTTCGGTCAAGGTC
Position: -74
Score: 3.4
Sequence: TTTTGAAATTGGTATTACCAAT
Locus tag: y0766
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase complex
Locus tag: y0767
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: y0768
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
y0766
pdhR
Transcriptional repressor for pyruvate dehydrogenase complex
y0767
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
y0768
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Position: -247
Score: 4.5
Sequence: AAATGAGATATTTCTCGCAAAA
Position: -81
Score: 3.6
Sequence: AAATGTGCATTCTGTTACGTAA
Locus tag: y3951
Name: ppiA
Funciton: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
y3951
ppiA
Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
Position: -103
Score: 4.3
Sequence: TATTTTGATAAGAATAACGTTA
Locus tag: y2074
Name: fsaB
Funciton: fructose 6-phosphate aldolase 2
y2074
fsaB
fructose 6-phosphate aldolase 2
Position: -166
Score: 4.4
Sequence: AAACGTGACGGCAATCAAACAT
Locus tag: y1767
Name: ptsG
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
y1767
ptsG
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
Position: -234
Score: 4.2
Sequence: AACTGTGAGCTGTTTCACTTTC
Locus tag: y0587
Name: rhaB
Funciton: rhamnulokinase
Locus tag: y0586
Name: rhaA
Funciton: L-rhamnose isomerase
Locus tag: y0585
Name: rhaD
Funciton: rhamnulose-1-phosphate aldolase
y0587
rhaB
rhamnulokinase
y0586
rhaA
L-rhamnose isomerase
y0585
rhaD
rhamnulose-1-phosphate aldolase
Position: -214
Score: 3.9
Sequence: GAAAGTGAAACAGCTCACAGTT
Locus tag: y0590
Name: rhaS
Funciton: L-rhamnose operon regulatory protein RhaS
y0590
rhaS
L-rhamnose operon regulatory protein RhaS
Position: -286
Score: 4.3
Sequence: AATTGAGATCACGATCACGGTA
Locus tag: y2862
Name: sdaC
Funciton: Serine transporter
y2862
sdaC
Serine transporter
Position: -254
Score: 4.5
Sequence: AATCGTGATCCTAATCACTGTT
Locus tag: y3071
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: y3070
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: y3069
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: y3068
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
y3071
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
y3070
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
y3069
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
y3068
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -126
Score: 4.8
Sequence: TTTGGTGATATATATCACATTC
Locus tag: y3301
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase
y3301
serA
D-3-phosphoglycerate dehydrogenase
Position: -128
Score: 3.7
Sequence: GAATGTGCGTTCATGCACATTT
Locus tag: y2908
Name: spr
Funciton: predicted peptidase, outer membrane lipoprotein
y2908
spr
predicted peptidase, outer membrane lipoprotein
Position: -208
Score: 5.4
Sequence: TAATGTGATCTGGATCTCAATT
Position: -158
Score: 4.6
Sequence: ATTTGTGATAGCGCTATCATTT
Locus tag: y1619
Name: CKO_00488
Funciton: LacI-family transcriptional regulator
y1619
CKO_00488
LacI-family transcriptional regulator
Position: -208
Score: 4.9
Sequence: TATTGTGAGATTGCTCATATAA
Locus tag: y2145
Name: tdk
Funciton: Thymidine kinase (EC 2.7.1.21)
y2145
tdk
Thymidine kinase (EC 2.7.1.21)
Position: -153
Score: 3.6
Sequence: TAGCGTGCTAATTATAGCATAA
Locus tag: y1043
Name: tesB
Funciton: Acyl-CoA thioesterase II (EC 3.1.2.-)
y1043
tesB
Acyl-CoA thioesterase II (EC 3.1.2.-)
Position: -149
Score: 5.4
Sequence: ATGTGTGATTTAAATCACAATT
Position: -97
Score: 4
Sequence: CAAGGTGACATAAATCACGAAA
Locus tag: y0444
Name: udp
Funciton: Uridine phosphorylase (EC 2.4.2.3)
y0444
udp
Uridine phosphorylase (EC 2.4.2.3)
Position: -151
Score: 3.6
Sequence: ATTAGTGATCATTGTCAAAACC
Locus tag: y3859
Name: uspA3
Funciton: Universal stress protein A
y3859
uspA3
Universal stress protein A
Position: -229
Score: 4.1
Sequence: AAAGTTGAGTGACATCACAAAA
Position: -109
Score: 3.6
Sequence: TTTTGCGATCAATATCTATAAA
Locus tag: y3600
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: y3599
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
y3600
uxaC
Uronate isomerase (EC 5.3.1.12)
y3599
uxaB
Altronate oxidoreductase (EC 1.1.1.58)
Position: -220
Score: 4.6
Sequence: TTATGAGATCTACACCACAATT
Locus tag: y4057
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: y4058
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
y4057
xylA
Xylose isomerase (EC 5.3.1.5)
y4058
xylB
Xylulose kinase (EC 2.7.1.17)
Position: -264
Score: 4.8
Sequence: AATTGTGGTGTAGATCTCATAA
Position: -160
Score: 4.2
Sequence: AAACATGATCGTTATCATAAAA
Locus tag: y4056
Name: xylF
Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
Locus tag: y4055
Name: xylG
Funciton: D-xylose transport ATP-binding protein XylG
Locus tag: y4054
Name: xylH
Funciton: Xylose ABC transporter, permease protein XylH
Locus tag: y4053
Name: xylR
Funciton: Xylose activator XylR (AraC family)
y4056
xylF
Xylose ABC transporter, periplasmic xylose-binding protein XylF
y4055
xylG
D-xylose transport ATP-binding protein XylG
y4054
xylH
Xylose ABC transporter, permease protein XylH
y4053
xylR
Xylose activator XylR (AraC family)
Position: -217
Score: 3.7
Sequence: TTATTTTATACAAAACATATAT
Locus tag: y0949
Name: yafK
Funciton: hypothetical protein
y0949
yafK
hypothetical protein
Position: -146
Score: 4.2
Sequence: TATTGTGATTAATCTTATATTG
Locus tag: y1174
Name: ybeD
Funciton: hypothetical protein
Locus tag: y1173
Name: lipB
Funciton: Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
y1174
ybeD
hypothetical protein
y1173
lipB
Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
Position: -295
Score: 3.9
Sequence: TATCGTTATACCCGTCATACTT
Locus tag: y2677
Name: ybiT
Funciton: ABC transporter ATP-binding protein
y2677
ybiT
ABC transporter ATP-binding protein
Position: -227
Score: 3.8
Sequence: TATTGTTATTCAGCTTACTGAA
Locus tag: y3024
Name: ybhK
Funciton: hypothetical protein
y3024
ybhK
hypothetical protein
Position: -145
Score: 3.9
Sequence: AGTTGTGATCGCTACCGCAACA
Locus tag: y2296
Name: ychH
Funciton: membrane protein
y2296
ychH
membrane protein
Position: -160
Score: 3.6
Sequence: TTTTTTTATTTATAGCACGAAC
Locus tag: y2013
Name: ydgD
Funciton: hypothetical protein
y2013
ydgD
hypothetical protein
Position: -161
Score: 4.1
Sequence: TAATGTAACACATAGCGCATTA
Locus tag: y1328
Name: csiE
Funciton: Stationary phase inducible protein CsiE
y1328
csiE
Stationary phase inducible protein CsiE
Position: -166
Score: 3.6
Sequence: TGATTTGATTTAATACAAATCA
Locus tag: y1878
Name: tcyP
Funciton: L-cystine uptake protein TcyP
y1878
tcyP
L-cystine uptake protein TcyP
Position: -85
Score: 5.1
Sequence: ATTTGCGATTTTTATCACATTT
Locus tag: y2164
Name: msrB
Funciton: methionine sulfoxide reductase B
Locus tag: y2163
Name: b1777
Funciton: conserved hypothetical protein
y2164
msrB
methionine sulfoxide reductase B
y2163
b1777
conserved hypothetical protein
Position: -152
Score: 3.7
Sequence: AAATTAGACACAGGTCATATTA
Locus tag: y2245
Name: hexR
Funciton: Phosphogluconate repressor HexR, RpiR family
y2245
hexR
Phosphogluconate repressor HexR, RpiR family
Position: -238
Score: 4.4
Sequence: AAATGGGATCTGAATCCCAAAT
Locus tag: y2914
Name: yejG
Funciton: hypothetical protein
y2914
yejG
hypothetical protein
Position: -73
Score: 3.9
Sequence: ATTTGTGATAACAGTCATCTCA
Locus tag: y2952
Name: ygbK
Funciton: hypothetical protein
y2952
ygbK
hypothetical protein
Position: -269
Score: 5.2
Sequence: AAAAGTGATTTAGATCACACAT
Locus tag: y0179
Name: yhcR
Funciton: hypothetical protein
Locus tag: y0178
Name: aaeA
Funciton: p-hydroxybenzoic acid efflux system component
Locus tag: y0177
Name: aaeB
Funciton: p-hydroxybenzoic acid efflux system component
y0179
yhcR
hypothetical protein
y0178
aaeA
p-hydroxybenzoic acid efflux system component
y0177
aaeB
p-hydroxybenzoic acid efflux system component
Position: -60
Score: 4
Sequence: AAATGTGAGTTAGCAAAAAAAT
Locus tag: y0107
Name: uraA1
Funciton: Xanthine permease
y0107
uraA1
Xanthine permease
Position: -57
Score: 4.1
Sequence: ATTTGTGTGCTGAATCGCGTTA
Locus tag: y4109
Name: yidA
Funciton: Phosphatase YidA
y4109
yidA
Phosphatase YidA
Position: -146
Score: 4.8
Sequence: TTATGTGCAGCAAATCACATAA
Locus tag: y2110
Name: mlc
Funciton: ROK family transcriptional regulatory protein
y2110
mlc
ROK family transcriptional regulatory protein
Position: -64
Score: 3.8
Sequence: TTATATGATATGGACAATAAAA
Locus tag: y1970
Name: yohC
Funciton: hypothetical protein
y1970
yohC
hypothetical protein
Position: -32
Score: 4.7
Sequence: TAGTGTGATGGGTAGCACAGAA
Locus tag: y2654
Name: yohJ
Funciton: LrgA family protein
Locus tag: y2655
Name: yohK
Funciton: LrgB family protein
y2654
yohJ
LrgA family protein
y2655
yohK
LrgB family protein
Position: -114
Score: 4.2
Sequence: AACTGTGATCTCGCTAGAATTA
Locus tag: y3302
Name: rpiA
Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
y3302
rpiA
Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Position: -186
Score: 3.7
Sequence: TATTGTGACTGCGTTAGCTTTG
Locus tag: y3922
Name: igaA
Funciton: IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system
y3922
igaA
IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system
Position: -229
Score: 3.8
Sequence: TGGTGTGACGCCGCTCATTATT
Locus tag: y0328
Name: ytfQ
Funciton: Putative sugar ABC transport system, periplasmic binding protein YtfQ precursor
Locus tag: y0329
Name: ytfR
Funciton: Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
Locus tag: y0330
Name: ytfT
Funciton: Putative sugar ABC transport system, permease protein YtfT
Locus tag: y0331
Name: yjfF
Funciton: Putative sugar ABC transport system, permease protein YjfF
y0328
ytfQ
Putative sugar ABC transport system, periplasmic binding protein YtfQ precursor
y0329
ytfR
Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
y0330
ytfT
Putative sugar ABC transport system, permease protein YtfT
y0331
yjfF
Putative sugar ABC transport system, permease protein YjfF
Position: -231
Score: 4.1
Sequence: TAATATGACCTGTGTCTAATTT
Locus tag: y2244
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
y2244
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Position: -222
Score: 3.4
Sequence: AATAGTGACGGATCGCAAGAAG
Locus tag: y1030
Name: hupB
Funciton: HU, DNA-binding transcriptional regulator, beta subunit
y1030
hupB
HU, DNA-binding transcriptional regulator, beta subunit
Position: -123
Score: 3.8
Sequence: TTACGTTATTGCAATAACCTAA
Locus tag: y0761
Name: ppdD
Funciton: predicted major pilin subunit
Locus tag: y0760
Name: pulE
Funciton: conserved protein with nucleoside triphosphate hydrolase domain
y0761
ppdD
predicted major pilin subunit
y0760
pulE
conserved protein with nucleoside triphosphate hydrolase domain
Position: -253
Score: 3.3
Sequence: ATTGGTGATCTTGTTATTACTG
Locus tag: y0769
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
y0769
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -39
Score: 3.3
Sequence: TATAACGATGGCAATCTCAGTA
Locus tag: y2784
Name: serC
Funciton: Phosphoserine aminotransferase (EC 2.6.1.52)
Locus tag: y2783
Name: aroA
Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
y2784
serC
Phosphoserine aminotransferase (EC 2.6.1.52)
y2783
aroA
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Position: -276
Score: 4.3
Sequence: TTATGTGAACGAATTAACACTG
Locus tag: y0771
Name: acnB
Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
y0771
acnB
Aconitate hydratase 2 (EC 4.2.1.3)
Position: -43
Score: 3.7
Sequence: TTTATTGACATAAATAAAAATA
Locus tag: y0310
Name: argC
Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Locus tag: y0311
Name: argB
Funciton: Acetylglutamate kinase (EC 2.7.2.8)
Locus tag: y0312
Name: argH
Funciton: Argininosuccinate lyase (EC 4.3.2.1)
y0310
argC
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
y0311
argB
Acetylglutamate kinase (EC 2.7.2.8)
y0312
argH
Argininosuccinate lyase (EC 4.3.2.1)
Position: -151
Score: 4
Sequence: AGGTGTTAGATTGATCACGTTT
Locus tag: y0382
Name: cyaA
Funciton: Adenylate cyclase (EC 4.6.1.1)
y0382
cyaA
Adenylate cyclase (EC 4.6.1.1)
Position: -197
Score: 3.4
Sequence: CGATGCGCTGCCCATAACAAAA
Locus tag: y0435
Name: ugpA
Funciton: SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3)
Locus tag: y0436
Name: ugpE
Funciton: SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3)
Locus tag: y0437
Name: ugpC
Funciton: SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
Locus tag: y0438
Name: ugpQ
Funciton: Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
y0435
ugpA
SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3)
y0436
ugpE
SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3)
y0437
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
y0438
ugpQ
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
Position: -72
Score: 3.5
Sequence: AAAACTGATTTATTTCGCTCAT
Position: -41
Score: 4.1
Sequence: TTTTTTGATGTGAGCCACACAG
Locus tag: y0434
Name: ugpB
Funciton: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
y0434
ugpB
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Position: -217
Score: 4
Sequence: TATGTTGATCTCTATCTCAGAA
Position: -147
Score: 4.1
Sequence: TATCATGATACCGGTAACAAAT
Position: -123
Score: 4.6
Sequence: AGATGTGACTTTTATCACAACA
Locus tag: y3875
Name: gntT
Funciton: gluconate transporter
y3875
gntT
gluconate transporter
Position: -75
Score: 3.7
Sequence: CAAATTGATTTACATCAAGAAA
Locus tag: y3945
Name: nirB
Funciton: nitrite reductase (NAD(P)H) subunit
Locus tag: y3944
Name: nirD
Funciton: nitrite reductase small subunit
y3945
nirB
nitrite reductase (NAD(P)H) subunit
y3944
nirD
nitrite reductase small subunit
Position: -254
Score: 3.3
Sequence: ATGAGTTATAGCCATTAAAAAT
Locus tag: y0015
Name: aceB
Funciton: malate synthase A
Locus tag: y0016
Name: aceA
Funciton: isocitrate lyase
y0015
aceB
malate synthase A
y0016
aceA
isocitrate lyase
Position: -181
Score: 3.4
Sequence: AAACGTGATTTAACGCCTGATT
Locus tag: y0499
Name: hupA
Funciton: DNA-binding protein HU-alpha (HU-2)
y0499
hupA
DNA-binding protein HU-alpha (HU-2)
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