Regulon of Crp in Photorhabdus luminescens subsp. laumondii TTO1

Properties
Regulator type:	Transcription factor
TF locus tag:	plu0395
Regulator family:	CRP
Regulation mode:	activator (repressor)
Biological process:	Carbon catabolism
Effector:	Cyclic 3',5'-AMP
Regulog:	Crp - Enterobacteriales
Statistics of regulated genes:
- Genes	155
- Operons	98
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 2301 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - CRP
By effector - Cyclic 3',5'-AMP
By pathway - Carbon catabolism

Regulated operons
	Locus Tag	Name	Function
Position: -176 Score: 4.4 Sequence: ACATGTGAGAAAGATCAAATTT Locus tag: plu2713 Name: guaB Funciton: inosine-5'-monophosphate dehydrogenase Locus tag: plu2712 Name: guaA Funciton: bifunctional GMP synthase/glutamine amidotransferase protein
	plu2713	guaB	inosine-5'-monophosphate dehydrogenase
	plu2712	guaA	bifunctional GMP synthase/glutamine amidotransferase protein
Position: -121 Score: 3.6 Sequence: TAGCATGATGTTAATCATTTAA Locus tag: plu3095 Name: ackA Funciton: acetate kinase Locus tag: plu3096 Name: pta Funciton: phosphate acetyltransferase
	plu3095	ackA	acetate kinase
	plu3096	pta	phosphate acetyltransferase
Position: -98 Score: 4.2 Sequence: TTGCGTGATCTTCCGCGCAAAA Locus tag: plu0074 Name: acs Funciton: acetyl-coenzyme A synthetase Locus tag: plu0073 Name: yjcH Funciton: membrane protein Locus tag: plu0072 Name: actP Funciton: acetate permease
	plu0074	acs	acetyl-coenzyme A synthetase
	plu0073	yjcH	membrane protein
	plu0072	actP	acetate permease
Position: -237 Score: 3.7 Sequence: TATTTTTATTAGATTAAAAATT Position: -138 Score: 4.6 Sequence: TTATGTGATTAAGATCAATATA Locus tag: plu2496 Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
	plu2496	adhE	Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -76 Score: 3.8 Sequence: AAGTCTGGTATGTATCACAGAT Locus tag: plu1616 Name: ansB Funciton: periplasmic L-asparaginase II
	plu1616	ansB	periplasmic L-asparaginase II
Position: -65 Score: 3.9 Sequence: TAATGTATTTTTATTCAAAAAA Locus tag: plu4745 Name: argE Funciton: acetylornithine deacetylase
	plu4745	argE	acetylornithine deacetylase
Position: -41 Score: 3.6 Sequence: CATAGTGATATTCAGAAAAATA Locus tag: plu3610 Name: iciA Funciton: chromosome replication initiation inhibitor protein
	plu3610	iciA	chromosome replication initiation inhibitor protein
Position: -262 Score: 3.6 Sequence: TGTTTTGATATTGATTTTATTT Locus tag: plu1262 Name: aroF Funciton: phospho-2-dehydro-3-deoxyheptonate aldolase Locus tag: plu1263 Name: tyrA Funciton: T-protein [includes: chorismate mutase and prephenate dehydrogenase]
	plu1262	aroF	phospho-2-dehydro-3-deoxyheptonate aldolase
	plu1263	tyrA	T-protein [includes: chorismate mutase and prephenate dehydrogenase]
Position: -62 Score: 3.8 Sequence: TATTGTAATTTCCATTATCTAT Locus tag: plu2630 Name: aroH Funciton: phospho-2-dehydro-3-deoxyheptonate aldolase
	plu2630	aroH	phospho-2-dehydro-3-deoxyheptonate aldolase
Position: -274 Score: 3.8 Sequence: AGATATAATTGGGGTCACAGTT Position: -211 Score: 5.6 Sequence: AATTGTGATAAATATCACATAT Locus tag: plu4137 Name: aspA Funciton: aspartate ammonia-lyase Locus tag: plu4138 Name: dcuA Funciton: anaerobic C-4-dicarboxylate symporter
	plu4137	aspA	aspartate ammonia-lyase
	plu4138	dcuA	anaerobic C-4-dicarboxylate symporter
Position: -66 Score: 3.8 Sequence: AAAGATGATGCGGAGCATATTA Locus tag: plu3110 Name: astC Funciton: bifunctional succinylornithine transaminase/acetylornithine transaminase Locus tag: plu3109 Name: astA Funciton: arginine succinyltransferase Locus tag: plu3108 Name: astD Funciton: succinylglutamic semialdehyde dehydrogenase Locus tag: plu3107 Name: astB Funciton: succinylarginine dihydrolase Locus tag: plu3106 Name: astE Funciton: succinylglutamate desuccinylase
	plu3110	astC	bifunctional succinylornithine transaminase/acetylornithine transaminase
	plu3109	astA	arginine succinyltransferase
	plu3108	astD	succinylglutamic semialdehyde dehydrogenase
	plu3107	astB	succinylarginine dihydrolase
	plu3106	astE	succinylglutamate desuccinylase
Position: -265 Score: 5.7 Sequence: TTATGTGATTTAAATCACATTT Locus tag: plu0047 Name: atpI Funciton: ATP synthase subunit I Locus tag: plu0046 Name: atpB Funciton: ATP synthase subunit A Locus tag: plu0045 Name: atpE Funciton: ATP synthase subunit C Locus tag: plu0044 Name: atpF Funciton: ATP synthase subunit B Locus tag: plu0043 Name: atpH Funciton: ATP synthase subunit D Locus tag: plu0042 Name: atpA Funciton: ATP synthase subunit A Locus tag: plu0041 Name: atpG Funciton: ATP synthase subunit C Locus tag: plu0040 Name: atpD Funciton: ATP synthase subunit B Locus tag: plu0039 Name: atpC Funciton: ATP synthase epsilon subunit
	plu0047	atpI	ATP synthase subunit I
	plu0046	atpB	ATP synthase subunit A
	plu0045	atpE	ATP synthase subunit C
	plu0044	atpF	ATP synthase subunit B
	plu0043	atpH	ATP synthase subunit D
	plu0042	atpA	ATP synthase subunit A
	plu0041	atpG	ATP synthase subunit C
	plu0040	atpD	ATP synthase subunit B
	plu0039	atpC	ATP synthase epsilon subunit
Position: -281 Score: 3.9 Sequence: TATTGTGCTATCTTTTAAATTG Position: -179 Score: 3.7 Sequence: AAACGTGGTGCGGGTAACCTTA Locus tag: plu2701 Name: b1821 Funciton: hypothetical protein
	plu2701	b1821	hypothetical protein
Position: -156 Score: 5.6 Sequence: AAATGTGATGTGAATCACACAA Locus tag: plu0518 Name: yedJ Funciton: hypothetical protein
	plu0518	yedJ	hypothetical protein
Position: -75 Score: 4.7 Sequence: CTATATGATATTTATCACATTA Locus tag: plu1547 Name: cdd Funciton: cytidine deaminase
	plu1547	cdd	cytidine deaminase
Position: -170 Score: 4.3 Sequence: AAGTTTGATATAGATAACGATA Locus tag: plu1593 Name: clpS Funciton: ATP-dependent Clp protease adaptor protein Locus tag: plu1594 Name: clpA Funciton: ATP-dependent CLP protease ATP-binding subunit
	plu1593	clpS	ATP-dependent Clp protease adaptor protein
	plu1594	clpA	ATP-dependent CLP protease ATP-binding subunit
Position: -111 Score: 4 Sequence: CTTTGTGAAATTATTCTAATAA Locus tag: plu0561 Name: creA Funciton: hypothetical protein
	plu0561	creA	hypothetical protein
Position: -194 Score: 4.6 Sequence: TATCGTTATCTATATCAAACTT Locus tag: plu1592 Name: cspD Funciton: cold shock-like protein
	plu1592	cspD	cold shock-like protein
Position: -102 Score: 4.6 Sequence: TATAGTAATCTGTGTCACAATA Locus tag: plu1965 Name: cycA2 Funciton: D-alanine/D-serine/glycine permease
	plu1965	cycA2	D-alanine/D-serine/glycine permease
Position: -213 Score: 4.2 Sequence: ATTTGCGAGCCATATCGAATAA Position: -195 Score: 4.6 Sequence: ATAAATGATTTATATCACACTT Locus tag: plu4760 Name: cytR Funciton: transcriptional repressor
	plu4760	cytR	transcriptional repressor
Position: -114 Score: 5.4 Sequence: AATTGTGATCTAAATCATAAAT Locus tag: plu2561 Name: dadA Funciton: D-amino acid dehydrogenase small subunit Locus tag: plu2560 Name: dadX Funciton: alanine racemase
	plu2561	dadA	D-amino acid dehydrogenase small subunit
	plu2560	dadX	alanine racemase
Position: -176 Score: 4.9 Sequence: TTATGTGATCTATATCTTAAAA Locus tag: plu3205 Name: dctA Funciton: C4-dicarboxylate transport protein
	plu3205	dctA	C4-dicarboxylate transport protein
Position: -95 Score: 5 Sequence: TAATTTGAGCCAGTTCACATTT Locus tag: plu4523 Name: deaD Funciton: ATP-independent RNA helicase
	plu4523	deaD	ATP-independent RNA helicase
Position: -223 Score: 3.7 Sequence: AAATGTGCGCATTGTCATGTTT Locus tag: plu0300 Name: dppA Funciton: dipeptide ABC transporter, substrate-binding protein Locus tag: plu0301 Name: dppB Funciton: dipeptide ABC transporter, permease protein Locus tag: plu0302 Name: dppC Funciton: dipeptide transporter Locus tag: plu0303 Name: dppD Funciton: dipeptide transporter ATP-binding subunit Locus tag: plu0304 Name: dppF Funciton: dipeptide transporter ATP-binding subunit
	plu0300	dppA	dipeptide ABC transporter, substrate-binding protein
	plu0301	dppB	dipeptide ABC transporter, permease protein
	plu0302	dppC	dipeptide transporter
	plu0303	dppD	dipeptide transporter ATP-binding subunit
	plu0304	dppF	dipeptide transporter ATP-binding subunit
Position: -124 Score: 4.4 Sequence: TTCAGTGATACCGATCAAAATT Position: -94 Score: 4.5 Sequence: ATTTGCGATTTAAATCACTAAA Locus tag: plu1968 Name: dsdC Funciton: DNA-binding transcriptional dual regulator
	plu1968	dsdC	DNA-binding transcriptional dual regulator
Position: -169 Score: 4.9 Sequence: TTTAGTGATTTAAATCGCAAAT Position: -139 Score: 4.4 Sequence: AATTTTGATCGGTATCACTGAA Locus tag: plu1969 Name: dsdX Funciton: DsdX permease
	plu1969	dsdX	DsdX permease
Position: -191 Score: 3.7 Sequence: CTAAGTGATAAACTTTACCAAT Locus tag: plu4088 Name: dusB Funciton: tRNA-dihydrouridine synthase B Locus tag: plu4089 Name: fis Funciton: DNA-binding protein Fis
	plu4088	dusB	tRNA-dihydrouridine synthase B
	plu4089	fis	DNA-binding protein Fis
Position: -133 Score: 3.8 Sequence: CAGTGAGATACAAATCTCACTT Position: -115 Score: 3.9 Sequence: ACTTGTGATCACCCTTGCAAAA Locus tag: plu4402 Name: fadB Funciton: 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase
	plu4402	fadB	4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase
Position: -288 Score: 3.8 Sequence: AAATGCTATCTTAAGCAAAAAA Position: -137 Score: 4 Sequence: ATTAGTGATGTGTATCTCAACC Locus tag: plu2134 Name: fadD Funciton: long-chain-fatty-acid--CoA ligase Locus tag: plu2135 Name: rnd Funciton: ribonuclease D
	plu2134	fadD	long-chain-fatty-acid--CoA ligase
	plu2135	rnd	ribonuclease D
Position: -161 Score: 4.3 Sequence: TTTCATGACCTTCATCACATTC Locus tag: plu3990 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
	plu3990	fadH	2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
Position: -88 Score: 4.7 Sequence: AATTATGATCTATATCAAATTC Locus tag: plu1614 Name: focA Funciton: formate transporter Locus tag: plu1613 Name: pflB Funciton: formate acetyltransferase
	plu1614	focA	formate transporter
	plu1613	pflB	formate acetyltransferase
Position: -180 Score: 4.7 Sequence: AAATGTGAGTAATCTCAAAAAA Locus tag: plu1992 Name: fruB Funciton: PTS system, fructose-specific IIA/FPr component Locus tag: plu1993 Name: fruA Funciton: PTS system, fructose-specific IIBC component
	plu1992	fruB	PTS system, fructose-specific IIA/FPr component
	plu1993	fruA	PTS system, fructose-specific IIBC component
Position: -72 Score: 3.7 Sequence: TTTAGTGATATAAATAGAACTG Locus tag: plu2858 Name: fruK Funciton: 1-phosphofructokinase
	plu2858	fruK	1-phosphofructokinase
Position: -188 Score: 5.6 Sequence: ATATGTGATATTTATCACAATT Locus tag: plu4136 Name: fxsA Funciton: suppressor of F plamsid exlusion of phage T7
	plu4136	fxsA	suppressor of F plamsid exlusion of phage T7
Position: -120 Score: 4.3 Sequence: TTGCGTGATTGGTATCTCAGAT Locus tag: plu0575 Name: galT Funciton: galactose-1-phosphate uridylyltransferase Locus tag: plu0576 Name: galK Funciton: galactokinase Locus tag: plu0577 Name: galM Funciton: aldose 1-epimerase
	plu0575	galT	galactose-1-phosphate uridylyltransferase
	plu0576	galK	galactokinase
	plu0577	galM	aldose 1-epimerase
Position: -224 Score: 5.4 Sequence: TATTGTGATGTGACTCGCATAT Locus tag: plu2558 Name: gapA Funciton: glyceraldehyde-3-phosphate dehydrogenase
	plu2558	gapA	glyceraldehyde-3-phosphate dehydrogenase
Position: -102 Score: 3.6 Sequence: TAACGTATTACTGATAACAAAT Locus tag: plu0197 Name: glpE Funciton: thiosulfate sulfurtransferase Locus tag: plu0196 Name: glpG Funciton: predicted intramembrane serine protease Locus tag: plu0195 Name: glpR2 Funciton: DNA-binding transcriptional repressor
	plu0197	glpE	thiosulfate sulfurtransferase
	plu0196	glpG	predicted intramembrane serine protease
	plu0195	glpR2	DNA-binding transcriptional repressor
Position: -250 Score: 4.9 Sequence: TATTGTGACAATTGTCACAATT Locus tag: plu4119 Name: glpT Funciton: glycerol-3-phosphate transporter Locus tag: plu4120 Name: glpQ Funciton: glycerophosphoryl diester phosphodiesterase
	plu4119	glpT	glycerol-3-phosphate transporter
	plu4120	glpQ	glycerophosphoryl diester phosphodiesterase
Position: -178 Score: 3.8 Sequence: TAGCGTAATTTTCATTACACTA Locus tag: plu3291 Name: glyA Funciton: serine hydroxymethyltransferase
	plu3291	glyA	serine hydroxymethyltransferase
Position: -74 Score: 4.4 Sequence: ACATGTGATCACATTAACAAAT Locus tag: plu1560 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating
	plu1560	gnd	6-phosphogluconate dehydrogenase, decarboxylating
Position: -136 Score: 5.5 Sequence: ATTTGTGATAAATATCACATTT Locus tag: plu0497 Name: gntK Funciton: gluconate kinase 1 Locus tag: plu0498 Name: gntU Funciton: Low-affinity gluconate transporter (Gluconate permease)
	plu0497	gntK	gluconate kinase 1
	plu0498	gntU	Low-affinity gluconate transporter (Gluconate permease)
Position: -241 Score: 4 Sequence: ATATTTGACCTGATTTATATTT Locus tag: plu4009 Name: gltB Funciton: glutamate synthase, large subunit Locus tag: plu4010 Name: gltD Funciton: glutamate synthase, small subunit
	plu4009	gltB	glutamate synthase, large subunit
	plu4010	gltD	glutamate synthase, small subunit
Position: -159 Score: 3.7 Sequence: AATAATGATAAAAAACAAATTT Position: -129 Score: 4.9 Sequence: TATTGTTACTGAGATCACAATT Locus tag: plu0990 Name: hpaG Funciton: 4-hydroxyphenylacetate catabolism Locus tag: plu0989 Name: hpaG Funciton: 4-hydroxyphenylacetate catabolism Locus tag: plu0988 Name: hpaE Funciton: 4-hydroxyphenylacetate catabolism Locus tag: plu0987 Name: hpaD Funciton: 4-hydroxyphenylacetate catabolism Locus tag: plu0986 Name: hpaF Funciton: 4-hydroxyphenylacetate catabolism
	plu0990	hpaG	4-hydroxyphenylacetate catabolism
	plu0989	hpaG	4-hydroxyphenylacetate catabolism
	plu0988	hpaE	4-hydroxyphenylacetate catabolism
	plu0987	hpaD	4-hydroxyphenylacetate catabolism
	plu0986	hpaF	4-hydroxyphenylacetate catabolism
Position: -285 Score: 3.9 Sequence: AATTTTAATTGTGATCTCAGTA Position: -279 Score: 5 Sequence: AATTGTGATCTCAGTAACAATA Locus tag: plu0991 Name: hpaR Funciton: 4-hydroxyphenylacetate catabolism
	plu0991	hpaR	4-hydroxyphenylacetate catabolism
Position: -144 Score: 4 Sequence: AATTCTGATATGCTTTGCAAAA Locus tag: plu0860 Name: hpt Funciton: hypoxanthine phosphoribosyltransferase
	plu0860	hpt	hypoxanthine phosphoribosyltransferase
Position: -203 Score: 4.7 Sequence: ATTTGTGATTATAAACACAAAA Locus tag: plu3193 Name: hutU Funciton: urocanate hydratase Locus tag: plu3192 Name: hutH Funciton: histidine ammonia-lyase
	plu3193	hutU	urocanate hydratase
	plu3192	hutH	histidine ammonia-lyase
Position: -287 Score: 3.7 Sequence: TTCTTTGACGTGAGTCAGAAAA Position: -282 Score: 3.8 Sequence: TGACGTGAGTCAGAAAACAAAA Position: -73 Score: 4.2 Sequence: TAATTTGATAGTGCTTACGTAA Locus tag: plu3090 Name: lrhA Funciton: transcriptional regulator, LysR family
	plu3090	lrhA	transcriptional regulator, LysR family
Position: -74 Score: 4 Sequence: TGTTATGATTTGACACACAGTA Locus tag: plu2719 Name: maeB Funciton: malic enzyme
	plu2719	maeB	malic enzyme
Position: -213 Score: 5.3 Sequence: AATTGTGATATTTATCGCAAAA Position: -150 Score: 4.1 Sequence: TTTTGTAATAGAGATCACACCC Locus tag: plu0458 Name: malE Funciton: maltose ABC transporter periplasmic protein Locus tag: plu0459 Name: malF Funciton: ABC superfamily (membrane), maltose transport protein Locus tag: plu0460 Name: malG Funciton: ABC superfamily (membrane), maltose transport protein
	plu0458	malE	maltose ABC transporter periplasmic protein
	plu0459	malF	ABC superfamily (membrane), maltose transport protein
	plu0460	malG	ABC superfamily (membrane), maltose transport protein
Position: -250 Score: 4 Sequence: GGGTGTGATCTCTATTACAAAA Position: -221 Score: 3.8 Sequence: AAGCGTGCCGTTGCCCACAAAA Position: -187 Score: 4.9 Sequence: TTTTGCGATAAATATCACAATT Locus tag: plu0457 Name: malK Funciton: maltose/maltodextrin transporter ATP-binding protein Locus tag: plu0456 Name: lamB Funciton: maltoporin Locus tag: plu0455 Name: malM Funciton: maltose regulon periplasmic protein
	plu0457	malK	maltose/maltodextrin transporter ATP-binding protein
	plu0456	lamB	maltoporin
	plu0455	malM	maltose regulon periplasmic protein
Position: -200 Score: 3.7 Sequence: AAATTTGAACCCGTTTACTATT Position: -132 Score: 3.9 Sequence: TATCGCTACAGTGATCACAATT Locus tag: plu1318 Name: nagE Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
	plu1318	nagE	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Position: -154 Score: 3.8 Sequence: GAATTTGATGTTGTTCAATTTT Locus tag: plu2821 Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3)
	plu2821	ndh	NADH dehydrogenase (EC 1.6.99.3)
Position: -122 Score: 4.4 Sequence: TATTGAGATGTAGATCATCAAT Locus tag: plu0587 Name: nhaA Funciton: Na+/H+ antiporter NhaA type
	plu0587	nhaA	Na+/H+ antiporter NhaA type
Position: -213 Score: 3.8 Sequence: TAATGTGATATCTATACTCTAT Locus tag: plu1399 Name: nupC Funciton: Nucleoside permease NupC
	plu1399	nupC	Nucleoside permease NupC
Position: -178 Score: 5.5 Sequence: TTGTGTGATTCACATCACATTT Locus tag: plu0519 Name: nupC2 Funciton: Na+ dependent nucleoside transporter
	plu0519	nupC2	Na+ dependent nucleoside transporter
Position: -164 Score: 4.3 Sequence: AACTTTGATTTGGATCAAGTTA Position: -39 Score: 3.8 Sequence: TATTTTGATTGACTTTAAATCA Locus tag: plu2478 Name: ompW Funciton: outer membrane protein W
	plu2478	ompW	outer membrane protein W
Position: -167 Score: 3.8 Sequence: GATTGTGATTCTGCTTAGATTA Locus tag: plu4248 Name: osmY Funciton: Osmotically inducible protein OsmY
	plu4248	osmY	Osmotically inducible protein OsmY
Position: -86 Score: 3.8 Sequence: TTTTTTGATAACTATCGCTGTT Locus tag: plu0100 Name: pck Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
	plu0100	pck	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Position: -205 Score: 3.8 Sequence: TGACGCGATGAGAATCATAAAA Locus tag: plu4379 Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
	plu4379	pgi	Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -243 Score: 4.4 Sequence: AAATGTGATTCAGTAAACGTTT Locus tag: plu1958 Name: putP Funciton: Proline/sodium symporter PutP (TC 2.A.21.2.1)
	plu1958	putP	Proline/sodium symporter PutP (TC 2.A.21.2.1)
Position: -127 Score: 3.7 Sequence: GTTCGTGATCATGATCTCTTTA Locus tag: plu4046 Name: rnk Funciton: Regulator of nucleoside diphosphate kinase
	plu4046	rnk	Regulator of nucleoside diphosphate kinase
Position: -207 Score: 4.4 Sequence: TTTAGTGATATATTTCATATCT Position: -178 Score: 4.2 Sequence: TTATTTGATCTAAATCCTAATT Position: -105 Score: 4.4 Sequence: TTATGTGATGGGAATAGCAATC Locus tag: plu3605 Name: serA Funciton: D-3-phosphoglycerate dehydrogenase
	plu3605	serA	D-3-phosphoglycerate dehydrogenase
Position: -297 Score: 3.7 Sequence: TTTTGCGCGGAAGATCACGCAA Locus tag: plu0075 Name: sodA Funciton: Manganese superoxide dismutase (EC 1.15.1.1)
	plu0075	sodA	Manganese superoxide dismutase (EC 1.15.1.1)
Position: -195 Score: 3.8 Sequence: GCTAGTGATATTAGTCACAAAT Position: -145 Score: 4.7 Sequence: AATTGTGATAGCGCTATCATTT Locus tag: plu1978 Name: CKO_00488 Funciton: LacI-family transcriptional regulator
	plu1978	CKO_00488	LacI-family transcriptional regulator
Position: -157 Score: 4.1 Sequence: TGGTGTGATGGTGGTCATGAAT Locus tag: plu2497 Name: tdk Funciton: Thymidine kinase (EC 2.7.1.21)
	plu2497	tdk	Thymidine kinase (EC 2.7.1.21)
Position: -223 Score: 4.2 Sequence: ATGTTTGACTTTGCGCACAAAT Locus tag: plu0563 Name: thrA Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) Locus tag: plu0564 Name: thrB Funciton: Homoserine kinase (EC 2.7.1.39) Locus tag: plu0565 Name: thrC Funciton: Threonine synthase (EC 4.2.3.1)
	plu0563	thrA	Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
	plu0564	thrB	Homoserine kinase (EC 2.7.1.39)
	plu0565	thrC	Threonine synthase (EC 4.2.3.1)
Position: -127 Score: 4.3 Sequence: CAATGTGATCTTCAACCCATTT Locus tag: plu3288 Name: treB Funciton: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) Locus tag: plu3287 Name: treC Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
	plu3288	treB	PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
	plu3287	treC	Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Position: -271 Score: 5.2 Sequence: TTTTGTGATTTATATCTCAAAA Position: -219 Score: 4 Sequence: TGAAGTGACATTTATCACTAAA Locus tag: plu4417 Name: udp Funciton: Uridine phosphorylase (EC 2.4.2.3)
	plu4417	udp	Uridine phosphorylase (EC 2.4.2.3)
Position: -251 Score: 4.6 Sequence: ATTTATGAGATAAATCACACAA Locus tag: plu2275 Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5)
	plu2275	xylA	Xylose isomerase (EC 5.3.1.5)
Position: -232 Score: 3.9 Sequence: TCAAGTGATTTAGTTCAAGCAA Locus tag: plu1195 Name: yafK Funciton: hypothetical protein
	plu1195	yafK	hypothetical protein
Position: -119 Score: 3.8 Sequence: ATTTGTGATCAGTTAAAACATT Locus tag: plu1498 Name: ybhK Funciton: hypothetical protein
	plu1498	ybhK	hypothetical protein
Position: -230 Score: 3.7 Sequence: ATTTGATATCAGTATCGCAATG Position: -152 Score: 4.4 Sequence: ATTTGCGAAGCTGTTCGCATAT Locus tag: plu1629 Name: ycaI Funciton: hypothetical protein Locus tag: plu1630 Name: msbA Funciton: fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component Locus tag: plu1631 Name: lpxK Funciton: tetraacyldisaccharide 4'-kinase
	plu1629	ycaI	hypothetical protein
	plu1630	msbA	fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component
	plu1631	lpxK	tetraacyldisaccharide 4'-kinase
Position: -295 Score: 4.9 Sequence: TATATTGATCTTAATCACATAA Locus tag: plu2495 Name: ychE Funciton: putative channel protein
	plu2495	ychE	putative channel protein
Position: -189 Score: 4.1 Sequence: AGTTGTGATCGTGTCCGCAATG Locus tag: plu2065 Name: ychH Funciton: membrane protein
	plu2065	ychH	membrane protein
Position: -267 Score: 4.6 Sequence: ATATGCGAGTCACATCACAATA Locus tag: plu2557 Name: msrB Funciton: methionine sulfoxide reductase B Locus tag: plu2556 Name: b1777 Funciton: conserved hypothetical protein
	plu2557	msrB	methionine sulfoxide reductase B
	plu2556	b1777	conserved hypothetical protein
Position: -132 Score: 3.7 Sequence: TTTTATGAAAAACATTAAATTA Locus tag: plu2121 Name: hexR Funciton: Phosphogluconate repressor HexR, RpiR family
	plu2121	hexR	Phosphogluconate repressor HexR, RpiR family
Position: -177 Score: 4 Sequence: TATTCTGATTATGATAAAATTA Position: -132 Score: 4 Sequence: ATATATGATTTTAACAACAATT Locus tag: plu2029 Name: yecF Funciton: hypothetical protein
	plu2029	yecF	hypothetical protein
Position: -193 Score: 3.9 Sequence: ATTTGTTAATGTGATCACATGT Locus tag: plu1559 Name: yegH Funciton: putative membrane protein
	plu1559	yegH	putative membrane protein
Position: -185 Score: 4.1 Sequence: AAATGAGAGATTGATCTCACTT Position: -183 Score: 3.6 Sequence: ATGAGAGATTGATCTCACTTTT Position: -141 Score: 3.8 Sequence: TAATGTAATACTATAAACACAA Locus tag: plu2865 Name: yejG Funciton: hypothetical protein
	plu2865	yejG	hypothetical protein
Position: -87 Score: 5.1 Sequence: AATAGTGATTTAGATCACCTTT Locus tag: plu1266 Name: raiA Funciton: stationary phase translation inhibitor and ribosome stability factor
	plu1266	raiA	stationary phase translation inhibitor and ribosome stability factor
Position: -147 Score: 3.8 Sequence: ATAAATAATATAAATCAAATAA Position: -90 Score: 3.7 Sequence: GAATGTGATAACCATCGTGTAT Locus tag: plu2507 Name: ygbJ Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Locus tag: plu2508 Name: ygbK Funciton: hypothetical protein
	plu2507	ygbJ	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
	plu2508	ygbK	hypothetical protein
Position: -268 Score: 3.7 Sequence: TAATTTAATTTAAATTTCAAAA Locus tag: plu4686 Name: yifB Funciton: magnesium chelatase family protein
	plu4686	yifB	magnesium chelatase family protein
Position: -119 Score: 4.8 Sequence: TTTCGTGCTGAATATCACATAT Locus tag: plu2226 Name: mlc Funciton: ROK family transcriptional regulatory protein
	plu2226	mlc	ROK family transcriptional regulatory protein
Position: -234 Score: 4.2 Sequence: TAATTTAATGTTTTTCATAAAA Locus tag: plu2122 Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
	plu2122	zwf	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Position: -225 Score: 4 Sequence: ATATATGATTGTTTTTAAATTA Locus tag: plu3543 Name: prpR Funciton: Propionate catabolism operon regulatory protein PrpR
	plu3543	prpR	Propionate catabolism operon regulatory protein PrpR
Position: -227 Score: 4.1 Sequence: AAATGTGAATCGACAAACAATT Position: -182 Score: 3.2 Sequence: ATATTTGAATTTTAATTCATTA Locus tag: plu3639 Name: pulE Funciton: conserved protein with nucleoside triphosphate hydrolase domain
	plu3639	pulE	conserved protein with nucleoside triphosphate hydrolase domain
Position: -261 Score: 3.6 Sequence: TTCTGTGAACGAATTAACATCG Locus tag: plu3619 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3)
	plu3619	acnB	Aconitate hydratase 2 (EC 4.2.1.3)
Position: -129 Score: 3.6 Sequence: TAATTTAAAAACAATCATATAT Locus tag: plu3542 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
	plu3542	prpB	Methylisocitrate lyase (EC 4.1.3.30)
Position: -137 Score: 4.3 Sequence: AATTGTGATCTTGGCAATATTT Locus tag: plu3142 Name: lsrR Funciton: LsrR, transcriptional repressor of lsr operon Locus tag: plu3141 Name: ydeV Funciton: putative kinase
	plu3142	lsrR	LsrR, transcriptional repressor of lsr operon
	plu3141	ydeV	putative kinase
Position: -131 Score: 3.9 Sequence: TGTTGCGAGTTCTGTCACGTTA Locus tag: plu3621 Name: lpdA Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
	plu3621	lpdA	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -222 Score: 3.5 Sequence: AATAGTGAATTTTTTCAATAAG Locus tag: plu3866 Name: hupB Funciton: HU, DNA-binding transcriptional regulator, beta subunit
	plu3866	hupB	HU, DNA-binding transcriptional regulator, beta subunit
Position: -92 Score: 3.5 Sequence: AAACACAACTTACCTCACATTT Locus tag: plu0122 Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
	plu0122	gdhA	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -205 Score: 3.3 Sequence: GTTTATACTCGCAATCACATAA Locus tag: plu3683 Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
	plu3683	metK	S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -59 Score: 3.6 Sequence: TTTTTTGAATAAAAATACATTA Locus tag: plu4744 Name: argC Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Locus tag: plu4743 Name: argB Funciton: Acetylglutamate kinase (EC 2.7.2.8) Locus tag: plu4742 Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5) Locus tag: plu4741 Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1)
	plu4744	argC	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
	plu4743	argB	Acetylglutamate kinase (EC 2.7.2.8)
	plu4742	argG	Argininosuccinate synthase (EC 6.3.4.5)
	plu4741	argH	Argininosuccinate lyase (EC 4.3.2.1)
Position: -126 Score: 4 Sequence: AGGTGTTAAATTGATCACGTTT Locus tag: plu4643 Name: cyaA Funciton: Adenylate cyclase (EC 4.6.1.1)
	plu4643	cyaA	Adenylate cyclase (EC 4.6.1.1)
Position: -167 Score: 3.6 Sequence: TGGTTTAATGTCGATCACCGTA Locus tag: plu0799 Name: tnaA Funciton: Tryptophanase (EC 4.1.99.1) Locus tag: plu0800 Name: tnaB Funciton: Low affinity tryptophan permease
	plu0799	tnaA	Tryptophanase (EC 4.1.99.1)
	plu0800	tnaB	Low affinity tryptophan permease
Position: -65 Score: 3.8 Sequence: GTTTTTGATTTATTTTAAATAT Locus tag: plu4396 Name: aceB Funciton: malate synthase A Locus tag: plu4395 Name: aceA Funciton: isocitrate lyase
	plu4396	aceB	malate synthase A
	plu4395	aceA	isocitrate lyase
Position: -179 Score: 3.4 Sequence: AAACGTGATTTAATGCTTTAAA Locus tag: plu0492 Name: hupA Funciton: DNA-binding protein HU-alpha (HU-2)
	plu0492	hupA	DNA-binding protein HU-alpha (HU-2)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Crp in Photorhabdus luminescens subsp. laumondii TTO1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --